Hymenobacter psoromatis: A0257_02715
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Entry
A0257_02715 CDS
T04376
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hyp
Hymenobacter psoromatis
Pathway
hyp03030
DNA replication
hyp03430
Mismatch repair
hyp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A0257_02715
03430 Mismatch repair
A0257_02715
03440 Homologous recombination
A0257_02715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyp03032
]
A0257_02715
03400 DNA repair and recombination proteins [BR:
hyp03400
]
A0257_02715
Enzymes [BR:
hyp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A0257_02715
DNA replication proteins [BR:
hyp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A0257_02715
DNA repair and recombination proteins [BR:
hyp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A0257_02715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
DNA_pol_A_exo1
GIY_YIG_2
DUF7508
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AMR26110
LinkDB
All DBs
Position
complement(609236..610714)
Genome browser
AA seq
492 aa
AA seq
DB search
MYAIIDLETTGGQPANDRITELAIFVHDGQRVVDSYTTLVNPGRAIPPFITQLTGITNDM
VAGAPRFHEVARKVVEMTEGCVFVAHNVRFDYSFLKKEFADLGYNYSRKTLCTVRLSRSL
IPGQPSYSLGKLCQNIGISLEGRHRAAGDAEATAVLFDRLLKITQASDAAEANAADALAR
VDALAPAGRSATAEKKPSPRRVAAMTQAIKTALLPPLITPELVASLPQETGVYYFHNEAG
EVIYVGKSINIYKRIQQHFAVDVKSRKSLDFKNSIADITYELTGSELVALLYESHLIKQL
KPAYNRAQRRSVFPAGIYLKTDENGYKCLYYGRADARNSEIPIIALGNQYKAQGFLYHKV
AKYNLCQKLCGLYKTTGACFDYQVHRCQGACVGQEPPESYNQRVDEAIDSITYEHESFVI
IGIGRQAQEKSLVVIENGRYVGFGYVDETFSARKLADFREAVKPYADNKDVQQIIRQYVR
TKRKGEQVKIFG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgctatcattgacttagaaactaccggcggccagccggccaacgaccgcatcacg
gagctggccatttttgtgcacgatggccagcgggtggtcgattcctacaccacgctggtg
aaccccggccgggccattccgcccttcatcacccagctcacgggcatcaccaacgacatg
gtggccggtgcgccgcgtttccacgaagtggcccgcaaggtggtggagatgaccgagggc
tgcgtattcgtggcgcacaacgtgcggtttgactactcctttctcaagaaggaatttgcc
gacctgggctacaactactcgcgcaaaacgctgtgcaccgtgcgcctcagccgctccctg
ataccgggccagccgagctatagcctgggcaagctgtgccagaatatcggcatttcgctg
gagggccggcaccgcgccgccggcgacgccgaggccaccgccgtgctcttcgaccgcctg
ctcaaaataacgcaggccagcgacgccgccgaggccaatgccgccgacgccctggcccgg
gtggatgccctggcccccgccggccgcagcgccaccgccgaaaaaaagcccagtccgcgc
cgcgtggcggcaatgacgcaggccatcaagacggccctcctaccccccctcatcacgccc
gagctggtggcctccctaccccaggaaacgggcgtgtactacttccacaacgaggcgggc
gaggtgatttacgtgggcaaaagcatcaacatctacaagcgcattcagcagcacttcgcg
gtggatgtgaagtcgcgtaagagcctggatttcaagaattccattgctgatattacctat
gagctgaccggctcggagctggtggcgctgctctacgagtcgcacctcatcaagcagctc
aagccggcgtataaccgggcgcagcggcgcagcgtgtttccggcgggcatttacctcaaa
accgacgaaaacggctacaagtgcctctactatggccgcgccgacgcccgcaactcggag
attcccattatcgcgcttggcaaccagtacaaggcgcaaggctttctctatcataaggtt
gcgaagtataacctgtgccagaagctgtgcgggctgtataaaacgacgggcgcgtgcttc
gactaccaggtgcaccgctgccagggcgcgtgcgtgggccaggagccgcccgagagctac
aaccagcgcgtggacgaggccatcgacagcatcacttacgagcacgagtcgttcgtgatt
atcggcatcggccggcaagcccaggagaagtcgctggtcgtgattgaaaacggccgctac
gtgggcttcggctacgtggatgagacgttttcggcgcgcaagctggccgattttcgggag
gccgtgaagccgtatgccgataacaaggacgtgcagcagattatccggcagtacgtgcgc
accaagcgcaagggcgagcaggtgaagattttcgggtaa
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