Hymenobacter psoromatis: A0257_02830
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Entry
A0257_02830 CDS
T04376
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hyp
Hymenobacter psoromatis
Pathway
hyp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A0257_02830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyp03019
]
A0257_02830
03016 Transfer RNA biogenesis [BR:
hyp03016
]
A0257_02830
Enzymes [BR:
hyp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A0257_02830
Messenger RNA biogenesis [BR:
hyp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A0257_02830
Transfer RNA biogenesis [BR:
hyp03016
]
Prokaryotic type
tRNA degradation factors
A0257_02830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
KH-I_KHDC4-BBP
S1_RRP5
KH_2
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AMR26129
LinkDB
All DBs
Position
637210..639348
Genome browser
AA seq
712 aa
AA seq
DB search
MPAPHAITKTLALPDGRQISIETGKLAKFADGAVVVRLGDTMLLATVVSAPSQREGVDFL
PLSVDYQEKFGSAGKIPGSFQRREGRLSDYEILICRLVDRILRPMFPKDYHYEVQVMITL
ISADKEVQPDALAALAASAALSISDIPFAGPISEVRVARIDGQFQINPKTSDLARADMDL
IVGATADSVAMVEGEMNEVSEEEMVAAIAFGHEAIKAQVQLQKDLAEAVGRTADSPTREY
PKYEENEALKKRVQDGIYQGAYEVARSGNASKAGRKEGFTGVKKAFLEKLVAEDAELNMK
QFSRYYSSAEKKAIRDMMVKERVRLDGRQLTEIRPIWSEINYLPGAHGSAIFTRGETQSL
TTATLGTKLDEQIVDQPLTKGYSKFMLHYNFPGFSTGEVKPNRGAGRREIGHGNLAARSL
KRVLPPDDENPYTIRIVSDILESNGSSSMATVCAGSLALMDAGVKVRAAVAGIAMGLVQD
KETGEYAVLSDILGDEDHLGDMDFKVTGTEKGICACQMDIKIQGLSNEILTAALHQAREG
RLHILREMAKTIAAPAAELKAHTPRSHKMLIDKEFIGAIIGPGGKVIQQIQKDTNATVII
EEKDEKGHVSIYAANQNDMQGAIDRIRAIAAQPEIGETYKGKVRSIQPYGAFVEIMPGKD
GLLHISEVTHERIASLEGVLEVGQEIDVKLVDIDKKTGKYRLSRKVLLEKQA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctccccacgcgattaccaaaaccctggcgctgcccgacggccgccagatttcc
atcgaaaccggcaagcttgccaaatttgctgacggtgccgttgtcgtgcgcctcggcgac
acgatgttgctggccaccgtcgtgtcggccccgagccagcgcgaaggcgttgacttcctg
ccgctgtcggtggactaccaggaaaaattcggctcggccggtaagattcccggctcgttt
cagcgccgcgaaggccgcctgagtgactatgaaatcctcatttgccgcctcgtggaccgc
attctgcggcctatgtttcccaaagactaccactacgaggtgcaggtaatgattaccctt
atttcggccgataaagaagtgcagcccgacgcgctggccgcgctggccgcctcggccgcg
ctctcgatttcggatattccgtttgccggaccgatttcggaagtacgggtagcccgtatc
gacggtcagttccagattaaccccaaaaccagcgacttggctcgtgccgatatggacctc
atcgtgggggccactgccgactcagtagcgatggtggaaggcgagatgaatgaagtgagt
gaggaagagatggtggcggccattgctttcggccacgaagccattaaagcccaggtgcag
ttgcaaaaggacctggccgaggctgtaggccgcaccgccgactcgcccacccgcgagtat
ccgaagtacgaggagaatgaggcgttgaaaaagcgtgttcaggacggtatctaccagggt
gcttacgaggtggcccgttcgggcaacgccagcaaggctggccgcaaagaaggctttacg
ggcgtgaaaaaagcgttcctagaaaagctagtagccgaagacgctgagctgaatatgaag
cagttcagccgctactattcgtcggcggagaagaaggctattcgcgatatgatggtgaag
gagcgcgtgcgcctcgacggacgtcagctcaccgaaattcgccctatctggtcggaaatc
aactacttgcccggtgcccacggctcggccatcttcacccgcggcgaaacgcaaagcctg
actacggctactctcggcaccaagctcgacgagcagattgtggaccagccgctgaccaag
ggctactcgaaattcatgctgcactacaacttccctggtttctcaactggcgaagtgaag
cccaaccggggcgccggccgccgcgaaatcggccacggcaacctggccgcccgttcgctc
aagcgcgtgctgccacccgacgacgaaaacccctacaccatccgtatcgtgtcggacatc
ctggagtcgaacggctccagctcgatggccaccgtctgcgccggctcgctggcgctgatg
gatgccggcgtgaaggtgcgcgccgccgtggcgggcatcgcgatgggcctcgtgcaggac
aaggaaaccggcgaatacgccgtgctgagcgatattctgggcgatgaggaccacctcggc
gacatggacttcaaggtaaccggcacggagaaaggcatttgcgcttgccagatggacatc
aaaatccaaggcctcagcaatgagattctgaccgccgcgctgcaccaggcccgcgaaggc
cgcctgcacattctgcgcgagatggccaagactattgccgccccggccgccgagttgaag
gcgcataccccgcgctcgcacaaaatgctgattgacaaagagtttatcggtgccatcatc
gggccgggcggtaaagtcatccagcagattcagaaggataccaatgctacggtaatcatt
gaggagaaggatgagaagggccacgtgagcatttacgcggctaaccagaacgatatgcag
ggtgccattgaccgcatccgcgctatcgcggcgcagcccgaaataggcgaaacctacaag
ggcaaggtgcgcagcattcagccctacggcgcgttcgtggagattatgccgggtaaggat
ggcctgctgcacatttcggaagtgacgcacgagcgcattgcttcgctcgaaggcgtgctg
gaagtgggtcaggaaatcgacgtgaagctggttgacatcgacaagaaaaccggtaagtat
cgcctctcgcgcaaagtgctgctcgaaaagcaggcgtaa
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