Hymenobacter psoromatis: A0257_04290
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Entry
A0257_04290 CDS
T04376
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hyp
Hymenobacter psoromatis
Pathway
hyp03420
Nucleotide excision repair
hyp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A0257_04290
03430 Mismatch repair
A0257_04290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyp03400
]
A0257_04290
Enzymes [BR:
hyp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A0257_04290
DNA repair and recombination proteins [BR:
hyp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A0257_04290
MMR (mismatch excision repair)
Other MMR factors
A0257_04290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
ResIII
AAA_11
nSTAND3
PAH
Motif
Other DBs
NCBI-ProteinID:
AMR26397
LinkDB
All DBs
Position
1005266..1007512
Genome browser
AA seq
748 aa
AA seq
DB search
MALDYHALLNPSQAAAVLQTEGPCMIIAGAGSGKTRVLTYRIAHLLEQGVDPFNILALTF
TNKAAKEMRARIEKVVGPNAKNLWMGTFHSVFAKILRSEADKIGYPRSFTIYDTQDTKTL
IGQIVKELELDDKLYKASTVLGRISAAKNKLVSVQQYLNDPVIKQDDEAAMRPKIGVLYQ
QYQQRCFKAGAMDFDDLLFQTNVLFRDHPDILNKYQNKFRFVMVDEYQDTNYSQYLITRK
LAAKERNICVVGDDAQSIYAFRGADITNILNFEKDYPELNVFKLEQNYRSTKNIVWAANS
VIKNNQAQLRKDVFSDNEDGNLIEVIKAASDNEEGKLIAQSIYEDKMNLHLSYDNFAILY
RTNAQSRAMEEALRKLNIRYKIVGGLSFYQRKEIKDLVAYLRLTVNPNDEQALRRVINYP
KRGIGDTTISKLINSAEEANHTLWEVVSNAEQFLPARVSNPVVGFAEKIKSYTAVAAKED
AFEAAKFIAKNSGMIEELYADKSIEGLSRYENIQELLNGIKEYVDDHEREDKSLGAFLQD
IALVTDSDLKDAAQEGEAVTMMTIHSAKGLEFRNVYIVGMEENLFPSQMMITSRADLEEE
RRLFYVAITRAEKKLTLSYATSRYQWGTLRSCEKSRFLDEIDPQYLNVKFAAGPAVSESP
FQHVFERRSNLVATPPRKTVATKYVAPADFQPSDTSNLQAGQRVEHAKFGFGKVATLEKQ
NGTVKAIIQFEEVGEKTLLLSFAKLRVL
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggctttagattatcacgcgcttttaaacccctcgcaggccgccgccgtcctccaaacg
gaaggcccctgcatgattatcgccggtgccggctcgggcaaaacccgggtactcacgtat
cgcatcgcgcacctgctggagcagggtgtggacccgttcaacatcctggcgctcaccttc
accaacaaggccgccaaggagatgcgcgcccgcattgaaaaggtggtcggccccaacgcc
aaaaacctgtggatgggcactttccactccgtttttgccaaaattctgcgctccgaggcc
gataaaatcggctacccccgctcgtttaccatctacgacacgcaggacacgaaaaccctc
atcgggcagattgtgaaggagttggagctggatgacaagctctacaaggccagcacggtg
ctgggccgcatctcggccgctaagaacaagctcgtgtcggtgcagcaatacctcaacgac
ccggttatcaagcaggacgatgaggcggcgatgcgccccaaaatcggagtgctgtatcag
cagtaccagcagcgttgctttaaggccggcgcgatggattttgacgacctattgttccag
accaacgtgctgttccgcgaccacccggatattctgaataaataccagaataaatttcgg
tttgtgatggtggacgagtaccaggacacgaactattcgcagtatttaattacccgtaag
ctcgcggctaaagagcggaatatctgcgtagtaggcgacgatgcgcagagtatctacgcc
ttccggggcgcggatattaccaatattctgaattttgagaaagactaccccgagctaaac
gtatttaagctggagcagaattatcgctctaccaaaaatatcgtctgggcggctaattca
gttattaaaaataaccaggcgcagttgcgcaaggacgttttttcggacaacgaggacggt
aatttaatcgaggtgattaaggccgcttccgacaacgaggaaggcaaattaattgcccag
tctatttacgaggacaagatgaatctgcatctgtcctacgacaattttgccattctttac
cgcaccaatgcccagagccgggcgatggaagaggcgctgcgcaaattaaatattcgctac
aagattgtgggtggcctgagcttttaccagcgcaaggaaatcaaggacttagtggcgtat
ttgcgactcacggtgaacccgaatgatgagcaggcattgcgccgggtaattaattatccg
aagcgcggcatcggcgacacgacgattagcaaattaattaattcggccgaggaagccaac
catacgctctgggaggtagtgagcaacgccgagcagtttttgccggcccgcgtatcaaat
ccggtggtgggctttgccgaaaaaatcaagagttacaccgccgttgcggcaaaggaagat
gcctttgaggcggccaagtttattgccaaaaactcgggcatgattgaagagttgtacgcc
gataaaagcatcgaaggcttgtcgcgctacgagaatattcaggaattgctcaatggcatc
aaggaatacgtggacgaccacgagcgcgaggacaagtcgctgggcgcgtttttgcaggat
atcgcgctcgttaccgactccgacctcaaggacgccgcccaggaaggcgaggccgtgaca
atgatgaccattcactcggctaaaggactggaattccgcaatgtgtacatcgtgggtatg
gaagaaaacctcttccccagccagatgatgataacctcgcgggccgacctggaggaagag
cgccggcttttttacgtggccattacgcgggccgaaaagaagctgacgctcagctacgct
acctcacgctaccagtggggcaccctgcgctcgtgcgagaagtcacgcttcctggatgag
attgacccgcaatatcttaacgtgaaatttgcggcgggcccggcggtgagcgaatcgccg
tttcagcacgtatttgagcgtcgctccaacctggttgctaccccccctcgtaagacggta
gcgaccaagtacgtggcacccgccgacttccaaccctccgacacgagtaacttgcaggcc
ggccagcgcgtggagcacgccaaatttggttttggcaaggtggccacgctcgaaaagcag
aacggcaccgtgaaggccatcattcagtttgaggaagttggcgagaaaacgctgctgcta
agctttgcgaaattgcgcgtgctataa
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integrated database retrieval system
