Hymenobacter psoromatis: A0257_04900
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Entry
A0257_04900 CDS
T04376
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hyp
Hymenobacter psoromatis
Brite
KEGG Orthology (KO) [BR:
hyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyp03032
]
A0257_04900
03400 DNA repair and recombination proteins [BR:
hyp03400
]
A0257_04900
Enzymes [BR:
hyp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A0257_04900
DNA replication proteins [BR:
hyp03032
]
Prokaryotic type
DNA Topoisomerases
A0257_04900
DNA repair and recombination proteins [BR:
hyp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A0257_04900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AMR26510
LinkDB
All DBs
Position
complement(1154204..1155322)
Genome browser
AA seq
372 aa
AA seq
DB search
MTATHALPRPKTRKKSLPPLHELAAHELYKDPARQAELAGLLYATDAGPGLRREAHGEGD
FVYFNAKGDKIEEEKTLARIHSFVIPPAWTDVWIAPNPNFHLQVTGHDAAGRKQYRYHPA
WDTARSLTKFSRLLAFGQKLGELRAQLRRDLARPALDRDKVVALVLTLMDQSFIRIGNEE
YAKKNKSYGLTTLLDKHAQIEGSDVRFAFVGKKGVAHDVTIHDRKLAGLVRKCKEIPGQH
LFQFYGTDGQRHPLESGHVNDYLHQHTGIALSAKDFRTWGGTVKMVECLEHALNGDVELA
PEKAIRQATKEVASNLGNTPTVCSKYYIHPQVTELFKSGRLIEYLRRHDADPKDQDALSP
TEHLVLEMLAEM
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctacccacgccctgccccgcccgaaaacccgcaagaaaagcctaccccccctc
cacgagctggccgcccacgagctgtataaagaccccgcccggcaggccgagctggcgggc
ctgctctacgccaccgacgccggccccggcctgcgccgcgaggcccacggcgaaggcgat
tttgtgtatttcaatgcaaaaggggataaaattgaggaggagaaaacgctggcccgcatt
cacagcttcgtgattccgccggcgtggaccgacgtgtggattgcgcccaaccccaacttt
cacctccaggtgacgggccacgacgcggccggccgcaagcagtaccgctaccatccggcc
tgggacacggcccgctcgctcaccaagttttcgcggctgctggcgtttggccagaagctg
ggcgagctgcgcgcccagctgcgccgggacctggcccgccccgccctcgaccgcgacaag
gtagtagcgctggtgctcacgctgatggaccagtcgtttattcgcatcggcaacgaggaa
tatgccaagaaaaacaagagctacggcctcaccacgctgctcgacaagcacgcgcagatt
gagggcagcgacgtgcgcttcgcgttcgtgggcaagaagggggtagcgcacgacgtcacc
attcacgaccgcaagctggccggcctggtgcgcaagtgcaaggagattccgggccagcac
ctgtttcagttctatggcaccgatggccagcgccacccgctggagtcgggccacgtgaac
gactacctgcaccagcacaccggcatcgcgctctcggccaaagacttccgcacctggggc
ggcaccgtaaaaatggtggagtgcctcgagcacgcgctcaacggcgacgtggaattagcc
cccgaaaaagccatccgccaggctacgaaggaagtggcttccaacttgggcaacacgccc
acggtgtgctccaaatactatattcatccacaggtgacggagctgttcaaatcgggccgc
ctcatcgagtacctgcgccgccacgacgccgacccaaaggaccaggatgccctgtcgccc
accgagcacctggtgctggaaatgctggcggagatgtga
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