Hymenobacter psoromatis: A0257_05120
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Entry
A0257_05120 CDS
T04376
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
hyp
Hymenobacter psoromatis
Brite
KEGG Orthology (KO) [BR:
hyp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hyp01002
]
A0257_05120
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hyp01011
]
A0257_05120
Peptidases and inhibitors [BR:
hyp01002
]
Cysteine peptidases
Family C82
A0257_05120
Peptidoglycan biosynthesis and degradation proteins [BR:
hyp01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
A0257_05120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AMR26551
LinkDB
All DBs
Position
complement(1206154..1207908)
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AA seq
584 aa
AA seq
DB search
MPFKIRLHFLSFALFVGLLGLPGLLASCGSKGSQIEQTNPKNDTVVTDNTSGPEPHLDSV
FVIRAMQANARFKTQERWARKFYRERQFRLGWFREHKLVPQANTFLSVVAKAKDDGLDPK
HYDIKQITDMLASLKSVGQDTARRNQLERKLDVTLSGSYFAWASDYYRGVANPRDTKNDA
WKVKRNKIKLDHALMTILRERESTYPYYDFAPLHPEYEHLKKALALLRARQAAGGWPALP
GTTHLKPGDNLPVVNLLRQRLLGGESTGQTPATTAATAKPVINITTPAGTVYDPTLVTTV
KNFQRDLGLPPTGLVTGETLHQLNVPIQARINQVILNMERWRWLPKKFEPDYLIVNIPEY
RLRVYEQGKEALTMRVIVGKALTATPVFSDKMEYVVLAPYWNVPYSIIDKELRSKLEANP
NYLDRLDMEVVKGYGRKATVIDPTTIDWAGVTQDNFKYTLRRRPGPKNDLGDVKFIFPNS
NDIYLHDTPHDELFAQTKRSFSHGCVRVEEPIKLATYLLRNNPNWDLTSIQDTIAEHREK
YITLKEKLPVYLVYLTAWADADGHAHFRDDIYGHDKALAKEYFE
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgccttttaaaattcgactacactttctttcgtttgccctgtttgtagggctgctcggc
ctgcctgggctgctggcctcgtgcggcagcaagggcagccaaatcgagcagacgaacccc
aaaaacgatacggtcgtcaccgacaataccagtggccccgagccgcacctcgacagcgtt
tttgtcattagggccatgcaggccaacgcccgctttaagacgcaggagcgctgggcccgc
aagttttaccgcgagcggcagtttcggctgggctggttccgggagcacaagctcgtgccg
caggccaataccttcctgagcgtagtagctaaagcgaaagatgatggcctggaccctaag
cactatgatatcaagcagataaccgatatgctagcctcgctcaaaagcgtgggccaggat
accgcgcgccgcaaccagctggagcgtaagctcgacgtgaccctgtcgggcagctatttt
gcctgggcttcggactattaccggggggtagcaaacccccgcgatactaagaacgacgcc
tggaaagtcaagcgcaataaaatcaagctcgaccatgccctgatgacgattttgcgggag
cgcgagagcacgtacccctactacgacttcgcgccgctgcaccccgaatacgagcacctc
aaaaaggcgctggccctgctgcgcgcccggcaggcggcgggcggctggcccgcgctgccg
ggcactacccacctcaagcccggcgacaacctgcccgtggtgaacctgctgcgccagcgc
ctgctgggcggcgagtccaccggccaaacccccgctacgacggctgccacggccaagccg
gtaattaatattactacccccgccggcaccgtctatgaccccacgctggtgacgaccgtc
aaaaattttcagcgtgacctgggcttgccgccgactggcctggtcaccggcgaaaccctg
caccagctcaacgtgcccatccaggcgcgcatcaaccaggttatcctgaacatggagcgc
tggcgctggctgcccaaaaaatttgagcccgactatcttatcgtgaacatccccgagtac
cgcctgcgggtgtacgagcagggcaaggaagctctcaccatgcgcgtcatcgtgggcaag
gcactcaccgcaacgcccgtcttttccgacaagatggagtacgtcgtgctggccccctac
tggaacgtgccctacagcattatcgacaaggagctacgctcgaagctcgaagctaacccc
aattacctcgaccgcctcgacatggaagtggtgaagggctacggccgcaaagccacggtc
attgaccctactactatcgactgggccggcgtcacgcaggataacttcaagtatactttg
cgccgccgccccggcccgaaaaatgacctcggcgacgtgaagtttatcttccccaactca
aacgatatttacctgcacgacacgccccacgacgagttgttcgcccaaaccaagcgcagc
ttcagccacggctgcgtgcgggtggaagagcctataaagctagctacttacctgctgcgc
aataatcccaactgggacctgaccagcattcaggataccatcgccgagcaccgcgagaag
tacatcacgctcaaggaaaagctgccggtgtacctggtatatctcactgcctgggccgac
gccgatggccacgcccacttccgcgatgacatttacggccacgataaagcactcgcgaaa
gagtattttgaatag
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