Hymenobacter psoromatis: A0257_06365
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Entry
A0257_06365 CDS
T04376
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
hyp
Hymenobacter psoromatis
Brite
KEGG Orthology (KO) [BR:
hyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyp03009
]
A0257_06365
Enzymes [BR:
hyp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
A0257_06365
Ribosome biogenesis [BR:
hyp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
A0257_06365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
MTS
TRAM
Cons_hypoth95
N6_N4_Mtase
PCMT
RrnaAD
UPF0020
PrmA
DUF4265
Motif
Other DBs
NCBI-ProteinID:
AMR26769
LinkDB
All DBs
Position
1487248..1488675
Genome browser
AA seq
475 aa
AA seq
DB search
MPSKATKLANSIPPEALQHVEIQDMVAEGKCLVRINNLVVFVNQVAPGDVVDLRISKAHK
RFMEAMPTRFHTYSELRATPFCQHFGTCGGCKWQHISYDAQLHYKQQQVADQLGRIGKVA
LPEIAQIMPSPERTYYRNKLEYTFSGNGWLTEEQIKDEGAQYDRRVLGFHTPGRFDKILD
VEHCHLQPEPSNEIRLFIRDYARQHRLPFGDMVRQTGLLRNLIIRTAASTGETMVILQCY
HDDEALLPLLDAVYAKFPQITSLNYVLNNKGNETFHDLEVVCYQGKPYIEEDMEGLRFRI
GPKSFYQTNSAGAHNLYKVARDFAEIKPTDLVYDLYTGAGTIANFVARQARRVVGVEYVE
QAVLDARVNSEINGVGNTEFFAGDMKDLLTEAFTSHHGHPDVIITDPPRAGMHEDVVQRL
VALRAPRLVYISCNPATQARDLELLDEVYKVTRVQPVDMFPHTHHVENVVLLELR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcaaagccaccaagctcgccaactctatcccgcccgaagcccttcagcacgtt
gaaattcaagacatggtggccgaaggcaagtgcctcgtgcgcatcaataacctcgtggtt
ttcgtgaaccaggtggcccccggcgacgtcgtggacctgcgcatcagcaaggcccacaag
cggtttatggaggccatgcccaccaggtttcacacgtattcggagctgcgcgctaccccg
ttttgccagcactttggcacctgcggcggctgcaagtggcagcacatcagctatgacgcg
cagctgcactacaagcagcagcaggtggcggaccagctcggccgcatcggcaaggtggcg
ctgcccgaaatagcgcaaatcatgccctcgcccgagcgcacctactaccgcaacaagctc
gaatacacgttcagcggcaatggctggctcacggaggagcagataaaggacgagggtgcg
cagtacgaccgccgcgtgctgggcttccacacgccggggcggtttgataagatattggac
gtggagcattgccacttgcagcccgagccgagcaacgaaatccgcctgttcatccgcgac
tatgcgcgccagcaccgcctgcccttcggcgatatggtgcggcagaccggcctgctgcgc
aacctcatcatccgcaccgccgcgagcaccggcgaaacgatggtgattttgcaatgctac
catgatgacgaggccctcctacccctgctcgacgcggtgtacgcgaagtttccgcagata
acatcgctcaactacgtgctcaacaacaaaggcaacgaaaccttccacgacctggaggtg
gtatgctaccagggcaagccctacatcgaggaagacatggaaggcctgcgcttccgcatc
ggccccaagtcgttttaccaaaccaactcggccggcgcccacaacctgtataaagtggcc
cgcgacttcgccgaaatcaagcccaccgaccttgtgtatgatttgtacacgggcgcgggc
accatcgccaatttcgtggcccgccaggcccgccgcgtagtcggtgtggagtacgtggag
caggccgtgctcgatgcccgcgtcaactccgaaatcaatggggtagggaacaccgagttc
ttcgccggcgacatgaaggacctgcttaccgaggccttcaccagccaccacggccacccc
gacgtcatcatcaccgacccgccccgcgccggcatgcacgaagacgtggtgcagcgcctc
gtggccctgcgcgccccccgcctcgtctatatcagctgcaaccccgccacccaggcccgc
gacctggaactactggacgaggtgtataaagtgacgcgggtgcagccggtggatatgttt
ccgcacacgcaccacgtggagaatgtggtgttgttggagttaaggtag
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