Hymenobacter psoromatis: A0257_06490
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Entry
A0257_06490 CDS
T04376
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hyp
Hymenobacter psoromatis
Brite
KEGG Orthology (KO) [BR:
hyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyp03400
]
A0257_06490
DNA repair and recombination proteins [BR:
hyp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A0257_06490
Archaeal homologous recombinant proteins
A0257_06490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_ATPase
AAA_21
ABC_tran
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AMR26793
LinkDB
All DBs
Position
1515601..1519338
Genome browser
AA seq
1245 aa
AA seq
DB search
MKIISLRFANLNSLPGPYLIRFDAAPLADTGLFAITGPTGAGKSTLLDAIAVGLYGRVPR
HDRQVGEMVSRHADDAFSEVEFEVHETNPDTGLTCRVRYRSRWEIKRKTRGKDKGGLNQD
AMTLALSASGQTFLSGKVAVPDKVSELSGLDFGQFEQAVLLSQGKFARFLHAPEPERSAL
LEKMTNVGIYSRLSVAAFEKAKAEKQATELLAARLDATRLLPDEERAALETQLDALHQQA
EDHHLEQQELTVGLTWRTILDQLDKQLRDTTREVESLRLAESTLQPEFVRLAGHERANAQ
ELATPLALAEVARQTLERGTGQLTRLADDLPHLTAAAETAATASDAAADAHLTAQTKEND
RRPILESARDQDAALVITRQELSKKQTAHAQNFGAHQRAQAAWDDQARALQGLADQQTTL
DSWLIDHSHEIDLKSQLNELGREIIDLQGAQREVATREARRGELLKNQRLAAADFSRQQQ
LETEASARQQAIKDEGQPCRTERDALLRDTTPANLAQRADDLTAHLQGLQQLLPKAEAAH
ERQARAADLAAHIQAEAPSLTTATTAVGHLETRRTDGQELLESYRRELRAQQALADLNAH
RQHLQAGQPCPLCGALEHAFAADFAPDADAQELRVMRQQKALANLEEELRAAAQDLTRRQ
TEQQQRQQQQQEALDAADAARRQAQELAAALAPTPPAPADPAAVRALLLDAAQAQNTAVT
DRRRLAELDEKLAVLREKYLAAGKEATDAQGEMRLLTQRQDTTAQELRQLAADLEHEREQ
AEIYQSTIREILRPHQLALPARPPYDGVLATLAERAATYEARRAALAEGRDKLLESRVQH
KAKGEELQNRQQQLAADKDLLDAEQLALDEQQAARLAHYAGSDPAAETEQLRRLTQQLAE
AERLAQAHHAQQRQALAIGQSAHAALQDQLTTDRTAHDERQTELAAALAAAGFATAAEAR
ALLLPPAEAERLHQRRQEHLTATAAADRRLADLTAEQQHHAEAGLTPLRAAELTAQLTTL
SNADDILQQKLGAVSNQLVQDDSARQQLAEGLRELQARRQEEQRWQDLAEQIGSAKGDKF
SRFAQGLTLSHLARLANLRLRQLTNRYSILKTPNQDLELQIIDHDQADSKRPMASLSGGE
SFLVSLALALGLSELAGYKARIESLFIDEGFGTLDPDSLNTALDALERLQHSGKMIGIIS
HVADLKERIGTQIRVQPGAGGNSTVRVVDVVGTETSCEVSREVVK
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgaagattatcagcctgcgctttgccaacctcaactcgctgccgggtccttacctgatt
cgcttcgacgcggcgccgctggccgacacgggcttgtttgccattacggggccgacgggc
gcgggcaaaagcacgctgctcgatgccatcgcggtgggcctgtatggccgggtgccgcgc
cacgaccgccaggtgggcgagatggtgagccgccacgccgacgacgctttttcggaagtg
gagtttgaagtgcatgaaaccaaccccgacaccggcctgacctgccgggtgcgctaccgc
tcgcgctgggaaatcaagcgcaagacgcggggcaaggacaaaggcggcctcaaccaggac
gcgatgacgctggcgctgagcgcttccggccagacgtttttgagtggcaaggtggcggtg
cccgacaaggtaagtgagctttcggggctcgattttgggcagtttgagcaggccgttttg
ctgagccagggcaaattcgcacgcttcctgcacgcgccggagcccgagcgcagcgccctg
ctcgaaaagatgaccaacgtgggcatctactcgcggctgtcggtggcggcgtttgagaaa
gctaaggccgaaaagcaggcgaccgagctgctggccgcccgcctcgacgcgacccgcctg
ctgcctgacgaagagcgcgcggccctcgaaactcagctcgacgccctgcaccagcaggcc
gaagaccaccacctggagcagcaggagctgaccgtgggtctgacttggcgcaccatcctg
gaccagctcgataagcagctgcgcgacacgacccgcgaggtggaaagcctgcggctggcc
gaaagtactttgcagcccgaattcgtgcggctggccggccacgagcgcgccaatgcccaa
gagcttgctacccccctcgccctagccgaagtggcccggcaaaccctggagcgcggcacc
gggcagctaacccggttagcggatgacctgccccacctgacggccgccgccgagaccgcc
gccacggcctcagacgccgccgctgacgcccacctcaccgctcaaaccaaggaaaacgac
cggcgcccgattctggaaagcgcccgcgaccaggacgcggccctggttatcacgcgccag
gagctgagtaaaaagcagacggcccacgcccaaaatttcggcgcgcaccagcgggcgcag
gcggcctgggatgaccaggcacgcgcgctgcaagggctggccgaccagcagaccacgctg
gatagctggctcattgaccacagccacgaaattgacctgaaaagccagctcaacgagcta
ggccgagaaattatcgacttgcaaggagcccagcgcgaggtggcgacccgtgaggcgcgc
cggggagaattacttaaaaatcaacgccttgcggccgccgactttagccgccagcagcag
ctcgaaaccgaggccagcgcccgccagcaagctattaaggacgagggccagccctgccgc
accgagcgcgacgcgctactgcgcgacactacccccgccaatctggcccagcgcgccgac
gacctcaccgcccacttgcaaggcctgcaacagctgctgcccaaggccgaagcggcccac
gagcggcaggcgcgggcggcggacttagctgctcacatccaggcagaagcgccgtccctg
accacggccactactgccgtgggccacctcgaaacccggcgtaccgatgggcaggagctg
ctggaaagctaccggcgcgagctgcgcgcccagcaggccctggccgacctcaacgcccac
cgccagcacttgcaagcgggccagccgtgcccgctgtgcggcgcgctggaacacgcattt
gccgccgattttgcccccgatgccgacgcgcaggagctgcgcgtgatgcggcagcaaaaa
gccctggctaacctcgaagaggagctgcgcgccgccgcccaggacctcacgcgccgccag
accgagcagcagcagcgccagcagcagcagcaagaagcgcttgatgccgccgacgcggcc
cgccgccaggcccaggagctggccgccgccctggcccctaccccccccgcgccggccgac
ccggccgccgtgcgcgcgctgctccttgatgcggcccaggcccaaaatacggccgtaact
gaccgccgccggctcgccgagctggatgagaagctggccgttttgcgcgaaaaatatttg
gctgctggcaaggaagctaccgatgcgcagggcgaaatgcgcctgctaacccagcgccag
gacaccaccgcgcaggagctgcgccagctggccgccgacctggagcacgagcgcgaacag
gccgaaatctaccaaagcactattcgggaaatcttgcggcctcaccagctggcgctgccc
gcccggccgccctacgacggcgtgctggccacgctggccgaacgcgcggccacctacgaa
gcgcgccgcgcggcgctggccgaagggcgcgataagctgctggaaagccgcgtgcagcac
aaagccaagggcgaagaattgcaaaaccggcagcaacagctggcggccgataaagacttg
ctcgacgccgagcagttggccctggacgagcagcaggccgcccgcctggcccactacgcc
ggctccgaccccgccgccgaaaccgagcagctgcgccgcctcacccagcagctggccgaa
gccgagcggctcgcccaggcccaccacgcccagcagcggcaggcgctggctatcgggcag
agcgcccacgcggcgctgcaagaccagctgaccaccgaccgcacggcgcacgatgagcgc
cagaccgagctggccgccgccctggccgccgccggctttgccaccgccgccgaggcgcgg
gcgctgctgctaccccccgccgaggccgagcgcctgcaccagcgccgccaggagcacctt
acggcaactgcggccgccgaccgccgcctggccgacctcaccgccgagcagcagcaccac
gccgaggccggccttacccccctccgcgcggccgagctcacggcccagctcaccacgctc
tccaatgccgacgatattttgcagcagaaattgggagccgtcagcaaccagctggtgcag
gatgatagtgcccgccagcagctggccgaaggcctgcgcgagctgcaagcgcgccggcag
gaagagcagcgctggcaggacctggccgagcaaattggctcggccaagggcgataagttt
agccgctttgcgcagggcctgacgctcagccacctggcccgcctggccaacctgcgcctg
cgccagctcaccaaccgctattccattctgaaaaccccgaaccaggacctggagctgcaa
ataatcgaccacgaccaagccgacagcaagcgcccaatggcctcgctttcgggtggcgaa
agcttcctggttagcctggcgctggcgctgggcctgagcgaattagccggctacaaggcg
cgcatcgaatccttgtttatcgacgagggcttcggcacgcttgaccccgactcgctcaac
acggccctcgacgccctggaacgccttcagcattcgggcaagatgattggcatcatctcg
cacgtggccgacctcaaggagcgcatcggcacccagattcgggtgcagcccggtgccggc
ggcaacagcaccgtgcgcgtggtggacgtagtaggcaccgaaaccagctgcgaggtgagc
cgtgaagtggtgaaatag
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