Hymenobacter psoromatis: A0257_10830
Help
Entry
A0257_10830 CDS
T04376
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
hyp
Hymenobacter psoromatis
Brite
KEGG Orthology (KO) [BR:
hyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hyp03000
]
A0257_10830
Transcription factors [BR:
hyp03000
]
Prokaryotic type
Helix-turn-helix
LacI family
A0257_10830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
Peripla_BP_4
LacI
HTH_31
HTH_3
HTH_Crp_2
HTH_24
HTH_26
Xre-like-HTH
NTP_transf_3
HTH_IclR
HTH_23
HTH_5
MarR_2
HTH_Tnp_ISL3
HTH_AsnC-type
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AMR27541
LinkDB
All DBs
Position
complement(2551463..2552641)
Genome browser
AA seq
392 aa
AA seq
DB search
MAVCVKCQQPDAVLKAGFVRGLQRYFCKACDYRFTLPGDTPALPRRRTQTTIDDLAQAVG
VTPSTVSRALNGRADVNATTRQAILEAARQLDYQPNLLAQHLKNNATHTIGVLIPDIERP
FFATAVSGIQQVADEAGYQVMICQSRESYLTEVRNVRALVASRVDGLLICHSRETQDFEH
VRRPAAKGLPIVHFDRVSDEVNSARVMIDDWNSAHAVVEHLAQQGCRRIAVLAGTEGLLI
SRQRVAGYQQALKEHRLEARPEWVRYNDFQPELTQAALAYWLALPEPPDAIFAIRYTDAF
DVILGLKQRGLRIPDDMAVVGFGDEFLAGMIEPALTTVNLHPYRIGQQAARLFLEQMELR
EQFHPRTYVIQGELIVRQSSRKIHEENFRLSL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggccgtctgcgtcaaatgtcagcagcccgatgccgtgctaaaggccggtttcgtgcgg
gggttgcagcgttacttctgcaaggcctgcgactaccgctttaccctgccgggcgacacg
cccgccctaccccgccgccgcacccaaaccaccatcgacgacctggcgcaggccgtgggc
gtcacgccttccacggtgtcgcgggcgctcaacgggcgcgccgacgtgaacgccaccacc
cggcaggccattctggaagccgcccgccaactcgactaccagcccaacctgctggcgcag
cacctcaaaaacaacgcgacccacaccatcggcgtgctgattccggacattgagcggccg
ttttttgccaccgccgtcagcggtattcagcaggtggccgacgaggccggctaccaggtc
atgatttgccagtcgcgcgagtcctacctcacggaggtgcgcaacgtgcgcgccttggtg
gccagccgggtcgatggcctgctgatttgccactcgcgtgaaacccaggactttgagcac
gtgcggcggccggcggccaagggcctgccgatagtgcatttcgaccgggtgagtgatgaa
gtgaacagcgcccgcgtcatgattgacgactggaacagcgcccatgccgtggtcgagcac
ctggcgcagcagggctgccgccgcatcgcggtgctggccggcaccgaggggctgctcatc
agccggcagcgggtagccggctaccagcaggcgctcaaagagcaccgcctggaggcccgt
cccgagtgggtgcgctacaacgactttcagcccgagctgacgcaggcggccctggcctac
tggctggccctgcccgagccgcccgatgccattttcgccatccgctacaccgatgccttc
gacgtgatactcggcctcaagcagcgtggcctgcgcattccggacgacatggcggtggtg
ggcttcggcgatgagtttctggcgggcatgattgagccggccctcaccacggtcaacctc
cacccgtatcgcattggtcagcaggccgcccggctgtttctggagcaaatggagctgcgc
gagcagtttcacccccgcacctatgtcattcagggtgagctcatcgtgcggcagtcttcg
cgcaaaattcacgaagaaaactttcggctgagcctctag
DBGET
integrated database retrieval system
