Hymenobacter psoromatis: A0257_13745
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Entry
A0257_13745 CDS
T04376
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hyp
Hymenobacter psoromatis
Brite
KEGG Orthology (KO) [BR:
hyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyp03009
]
A0257_13745
Enzymes [BR:
hyp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
A0257_13745
Ribosome biogenesis [BR:
hyp03009
]
Prokaryotic type
ribosomal protein modification factors
A0257_13745
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
AMR28047
LinkDB
All DBs
Position
3244227..3245540
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AA seq
437 aa
AA seq
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MRVRTLKQNKVNVITLGCSKNLVDSEVLMGQLLANDFQVTHEAKKSDANIVIINTCGFID
NAKQESIDTILRYAEEKENGKLEKLYVTGCLSQRYKDELEAEIPQVDAYFGTLELPQMLK
VLEADYKKELVGERLLTTPKHYAYFKIAEGCNRPCSFCAIPLMRGQHVDRPMEDLVTEAK
RLVNMGTKELILIAQDLTYYGLQAYGERKLPELLERLSDVAGVDWIRLQYAYPSQFPLAA
LDVMRERPNVCRYLDMPLQHISDNMLKTMRRGITGRRTKELVREIRDRVPGIALRTTLIA
GHPGETEADFEELCEFVQESKFERLGIFTYSHEENTHSHTLADDVPAEVKQERADRIMEI
QQQISLDYNESRVGQTYKVLFDRLEGGYYVGRTEFDSPEVDNEVLVLATNDLHIPQGSFA
NVHITGASDFDLYGEVI
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcagaacccttaaacaaaacaaagtcaacgttataacgctgggctgctccaag
aacctcgtcgatagcgaggtgctcatgggccagctgctggccaacgacttccaggtgacg
cacgaggccaagaagtcggatgctaacatcgtcattatcaatacctgcggctttatcgac
aatgccaagcaggagagcatcgacactatcctgcgctacgcggaggagaaggagaatggc
aagctggagaagctgtacgtaacgggctgcctctcacagcgctacaaagacgagctggag
gcggagattccgcaggtcgatgcctatttcggcaccctggagctgccccagatgctgaaa
gtgctggaagccgactacaaaaaggagctggtgggcgagcgcctgctcaccacgcccaag
cactacgcctacttcaaaatcgcggagggctgcaaccggccgtgctcgttctgcgccatc
ccgctgatgcgcggccagcacgtggaccggccgatggaggacctcgtgaccgaggccaag
cgcctggtgaacatgggcactaaagagctgattctcattgcccaggacctgacctactac
ggcttgcaagcctacggcgagcgcaaattgcccgagttgctggagcgcctgagcgacgtg
gcgggcgtggactggattcggctgcaatacgcctacccctcgcaatttccgctggcggcg
ctggacgtgatgcgcgagcgccccaacgtgtgccgctacctcgatatgcccttgcagcac
atttcggataacatgctgaaaaccatgcgccggggcatcacgggccgccgcaccaaggag
ctggtgcgcgagattcgcgaccgcgtgccgggcattgcactgcgcaccacgctcatcgcg
ggccaccccggcgaaacggaagccgactttgaagagctgtgcgaattcgtgcaggaatcg
aagtttgagcggctgggcattttcacctattcacacgaggaaaacacgcattcgcacacc
ctggccgacgacgtgccggccgaggtgaagcaggagcgcgccgaccgcatcatggaaatt
cagcagcagatatcgctggattacaacgagtcgcgcgtgggccagacgtataaggtgctt
ttcgaccggctcgaaggcggctactacgtgggccgcaccgagttcgactcgcccgaggtg
gataatgaggtattagtgctggctacgaatgacttgcacatcccgcagggcagctttgcc
aacgtgcacattacgggggcatcggacttcgatttgtacggcgaggttatctga
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