Hymenobacter psoromatis: A0257_14270
Help
Entry
A0257_14270 CDS
T04376
Name
(GenBank) hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hyp
Hymenobacter psoromatis
Pathway
hyp03410
Base excision repair
hyp03430
Mismatch repair
hyp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A0257_14270
03430 Mismatch repair
A0257_14270
03440 Homologous recombination
A0257_14270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyp03400
]
A0257_14270
DNA repair and recombination proteins [BR:
hyp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
A0257_14270
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A0257_14270
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A0257_14270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AMR29779
LinkDB
All DBs
Position
3361190..3362974
Genome browser
AA seq
594 aa
AA seq
DB search
MGISPLLAQLLVQRGIDTPAAAHDFFEPDLAKLASPWLMCDMDRAVARVRKALDGGERIL
VLGDYDVDGITSVALVVSFLRSLIESADTVDEASRFQPYIPDRQREGYGISMQAVDFAKE
NGLSLIIALDCGVKAVEQVAYANTQGVDFVICDHHLPGEVLPPAVAVLDPKRLDCTYPYP
DLSGCGVGFKLLQALTEQLNLPLAPLYAQLDLVTVSIAADVVPVTGENRILAAHGLRRFN
VTQAAAFAVPLPSALASADTLDGPAPLPPTPADGLRPGLAALHELATPRQGPLTLSSLVF
GFAPRINAAGRMGDAHRAVNMLLAATQQEARYTAEVVDHMNQERRLSDARTTQEALALIA
EDPEGATLPATVLYQAHWPQGVLGIVASRCLDQYYRPTVILTERDGLATGSARSVAGFDV
HEVLEACAPLLRQFGGHKAAAGLALPIENVPAFREQFMREVAARLPAGQHPVRPVDIDAV
LDFTQLTEEFLGHLVLLEPYGPGNPAPVFASRGLRAVPGSVRPVGQAGHLKIRLMQPAQS
PGLVLEGIGFGLGHYLPRLLEAPDAALSACYVLEMNEFRGQRSLQLRLLDLRWE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
ctgggtatcagccccttgctagcccagctgctggtgcagcgcggcatcgacacgcccgcc
gccgcccacgatttttttgagcccgacctggccaagctggcttcgccctggctgatgtgc
gacatggaccgggccgtggcccgcgtgcgcaaggccctcgacgggggcgagcgcatcctg
gtgctgggcgactatgacgtggacggtattacgtcggtagcgctggtagtcagctttttg
cgttctttaattgaaagcgccgatactgttgacgaagcaagccgcttccagccctacatc
cccgaccgccaacgcgagggctacggcatctcgatgcaggccgtggactttgccaaggaa
aacggcctcagcctgattatcgccctcgactgcggcgtgaaggccgtggagcaggtagcg
tatgccaacacgcagggagtggacttcgtgatatgcgaccaccacctgcccggcgaagtg
ctgccgccggccgtggccgtgctcgaccccaagcgcctggattgtacgtatccctacccc
gacttgtcgggctgcggcgtcggcttcaagcttttgcaagcccttacggagcagcttaac
ctgcccctggccccgctctacgcgcagctcgacctcgtgacggtgagcatcgcggccgac
gtggtgcccgtgaccggcgaaaaccgcattctggccgcccacggcctgcgccgcttcaac
gtgacgcaggcggcggcctttgccgtgcccctgccttcggccctggcctcagccgatacg
cttgatggccccgcgcccctaccccccacgcctgccgatggcctgcgtcccggcctggcg
gcgctgcacgagcttgctaccccccgtcaggggccgctcacgctcagctcattagtgttt
ggttttgcgccgcgcatcaacgcggccggccgcatgggcgacgcccaccgcgccgtgaat
atgctgctggccgccactcagcaggaagcccgctacaccgccgaggtggtggaccacatg
aaccaggagcgccgcctctccgacgcgcgcaccacccaggaggcgctggcgctcattgcc
gaagaccccgagggtgccacgttgccggccaccgtgctctaccaggcgcactggccgcag
ggcgtgctgggtatcgtggcctcgcgctgcctcgaccaatactaccgccccaccgtcatc
ctcaccgagcgcgatggcctggccacgggctcggcgcgctcggtggcgggcttcgatgtg
cacgaagtattggaggcctgtgcgccgctgctgcgccagtttggcggccacaaggcggca
gcggggctggccctacccatcgaaaacgtgccggctttccgcgagcagtttatgcgcgag
gtggcggcccgcctgcccgccggccagcacccagtgcgcccggtggacatcgacgcggtg
ctcgacttcacgcagctaaccgaggagtttttgggccatttggtgctgctggagccgtat
gggccgggcaacccggcaccggtttttgccagccggggcctgcgcgcggtgcccggctcg
gtgcggcccgtgggccaggccggccacctcaaaatcaggctgatgcagcccgcgcagtcg
ccgggcctggtgctcgaaggcatcggctttgggctgggacactatttgccgcgcctgctc
gaagcgcccgacgccgccctgagcgcgtgctacgtactcgaaatgaacgagttccgaggc
cagcgcagcttgcagctgcggctgctggatttgcgctgggaatga
DBGET
integrated database retrieval system
