Hymenobacter psoromatis: A0257_17050
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Entry
A0257_17050 CDS
T04376
Name
(GenBank) hypothetical protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hyp
Hymenobacter psoromatis
Brite
KEGG Orthology (KO) [BR:
hyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hyp03016
]
A0257_17050
Enzymes [BR:
hyp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
A0257_17050
Transfer RNA biogenesis [BR:
hyp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A0257_17050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AMR28635
LinkDB
All DBs
Position
3975927..3977108
Genome browser
AA seq
393 aa
AA seq
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MKPTIHYLTTAAQVAEAAAHFATLPRIGIDLEFDDNRYRYGRHLALIQVFDGTTVYLIDP
LPLEPEMAAGLAPLFAVLRDPAVAKVFHSCKSDILLLDELFSVTCRTIVDTSVQFTLLAL
EDNNISLGRLIQSELGFEVDKGEQKSNWLKRPLTEAQKEYAANDVLYLFELTDRLTVRLQ
EQGRAQWAAEENQALEAVRYGRGELRPHLRLAGKFRIGPQELPLFRELYALRDRVARLLD
RPSYMVLSNDRLAEITHQPIASHGALRTAGGLHPELKRAPYADELVALATAELAPDGPLP
PDQRRPQPFRRRFGGPVAARAEAREGLLNALKNHLATDFSPVLANTVLSNRLIGDVVEQG
SLAALRPWQRQLLGETAGQHGLAISELEEPLQA
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaaccattcactacctcaccacggccgctcaggtggccgaggccgccgcccat
tttgctaccctgccccgcatcggtatcgacctggaattcgatgataaccgctaccgctac
ggtcgtcacctggccctgattcaggtattcgacggcactaccgtttacctgattgacccc
ctacccctggagcccgagatggccgccggcctggcgccgctgttcgcggtgctgcgcgac
cccgccgtggccaaggtctttcactcctgcaaatcggatattttgctgctcgacgagctg
tttagcgtcacgtgccgcaccattgtcgataccagcgtgcagttcacgctgctggctttg
gaagacaataatatttccctgggccgcctcattcagagcgagttgggctttgaggtggat
aagggcgagcagaagtcgaactggctcaagcgccccctcaccgaagcccaaaaagagtac
gccgccaacgacgtgctctacctgttcgagctgaccgaccgcctcaccgtgcgcctgcaa
gagcagggtagggcgcagtgggcggccgaagaaaaccaggccctcgaagccgtgcgctac
ggccgcggcgagctgcgcccgcacctgcgcctggccggcaagtttcgcatcggcccgcag
gagctgccgctgtttcgggaactctacgcgctgcgcgaccgcgtggcacggctgctcgac
cgccctagctacatggtgctcagcaacgaccggctggccgaaatcacgcaccagcccatt
gcttcgcacggcgcgctacgcaccgccggcggcctgcaccccgagctcaagcgcgcccct
tacgccgacgagctggtggccctcgccaccgccgagctggcccccgacggccccctaccc
cccgaccagcgccggccgcagccgtttcgccgccgcttcggtggcccggtggcggccagg
gccgaagcccgcgaaggcttgctcaacgccctcaaaaaccacctggccactgacttcagc
cccgtgctggccaacaccgtgcttagcaaccgcctcatcggcgacgtggtggagcagggc
agcctggccgccctgcgcccctggcagcgccagctgctgggcgaaaccgccggccaacac
ggcttggctatcagtgagttggaagagccgctgcaagcatag
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