Hymenobacter psoromatis: A0257_19900
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Entry
A0257_19900 CDS
T04376
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
hyp
Hymenobacter psoromatis
Pathway
hyp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A0257_19900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hyp03021
]
A0257_19900
03019 Messenger RNA biogenesis [BR:
hyp03019
]
A0257_19900
Transcription machinery [BR:
hyp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
A0257_19900
Messenger RNA biogenesis [BR:
hyp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A0257_19900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
AAA_25
AAA_22
ATPase_2
NACHT
AAA
Motif
Other DBs
NCBI-ProteinID:
AMR29132
LinkDB
All DBs
Position
4677667..4679925
Genome browser
AA seq
752 aa
AA seq
DB search
MYTLNELKDRLLSELKEVAEQLNVGNFKRLSKQDLIYKILDHQASLPTGQLPDKKPTPPP
AAEAPAPASAAPAEAEAAPARGSRGGAGRRRSSADETPGELPFSDVAAPAPVVAKPAETA
EPAAVVTEETSQPTRLEKVEADEEAVANVSVQAEEATVPPTETNPTAETHSADENSPPRR
ERRERVDRAGRPLPRREPGQPVAAAGGSAPVASSDTAQPEPEAVADTYADRRETREQRFE
RENRDGRDSRDPRDNAPRLGRNDQPRNEFRENREPRENRDNNGQPRQPNGVGATDQPRLS
REERYAQREAQRQQRREERQRTGADGQPVAVEQPAGSQQNASGQPQQERRDDGPRQPQPE
RRDDGQRQPQQAPRPARAPELDLVVPGSGTMELMADGGYGFLRSPYYNYLSSPDDIYVSP
QQVRQFGLKAGDTVSCTMRPPRENEKYFALVNVENINGRTVEEVRDRVPFSHLTPLFADE
KLKLSTKPTQVSTRVLDLFAPIGKGQRGLIVAQPKTGKTVLLQEIANAISENHPEVYLII
LLIDERPEEVTDMARSVKAEVLSSTFDEMADRHVKIAELALDKARRLVECGHDVVILLDS
ITRLARAYNTVQPSSSRILSGGIDAGALQKPKRFFGAARNIEGPGSLTIIATALIETGSK
MDEVIFEEFKGTGNMELQLDRKLANKRVFPAIDIPASGTRREDLLMSRDELSRVWVLRKF
MTDMSATEAMEFLKDRMKGTKDNEEFLLAMNG
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtatacccttaatgagctgaaggaccggctgttgtctgagctgaaagaagttgctgag
cagctgaacgttggtaactttaagcgcctcagcaagcaggatttgatttataaaatcctc
gaccatcaggcgtcgctgcccaccggccagctgcccgataaaaagcctaccccccctccg
gcggccgaagcgcccgcgccggccagtgcggcccccgctgaagccgaagcggcccccgcg
cgcggcagtcggggcggtgccggccgccggcgctcttccgccgatgaaacgcccggcgaa
ttgccattttccgatgtggcggcccccgccccagtagtggctaagcccgccgaaaccgct
gagccagcggcagttgtgaccgaagaaacctcgcagcctacccgcctcgaaaaggtagaa
gccgatgaagaggccgtggccaacgtgtcggtgcaagccgaagaagccacggtgccaccc
accgaaaccaaccccaccgccgaaacgcactcggccgacgagaactccccgccccgccgc
gagcggcgcgagcgcgtggaccgcgccggccggccgctgccccgccgtgagcccggccag
cccgtggccgctgccggtgggtcggctcccgtagcttcttccgacacggcgcagcctgag
ccagaagcagttgccgacacctacgccgaccgccgcgaaacccgcgaacagcgcttcgag
cgcgaaaaccgggacggccgcgacagccgcgacccgcgggacaacgccccgcgcctgggc
cgcaacgaccagccccgcaatgagtttcgcgaaaaccgggagccgcgcgagaaccgcgac
aacaacggccagccccgccaacctaacggggtaggggccaccgaccagccccgcctcagc
cgcgaggagcgctatgcccagcgcgaagcccagcgccagcagcgccgcgaggagcgccag
cgtaccggtgccgatggccagcccgtagcagttgagcaacccgcaggcagccagcaaaat
gcgagcggccagccgcaacaggagcgccgcgacgatggcccgcgccagccgcagccggag
cgccgcgacgacggccagcgccagccgcagcaagcgccgcgcccggcccgcgccccggag
cttgacctcgtggtgcccggctcgggcacgatggagctgatggccgacggcggctacggc
ttcctgcgttcgccttattataactacctgtcctcgcccgacgacatctacgtgtcgccg
cagcaggtgcggcagtttggcctcaaggctggcgacacggtgagctgcaccatgcgcccg
ccccgcgaaaatgagaagtatttcgccttggtgaacgtggaaaacatcaacggccgcacg
gtggaggaagtacgcgaccgcgtgccgttcagtcacttaacgccgctttttgctgatgag
aagctcaagcttagtaccaagccgacccaggtgagcacccgcgtgctcgacctgtttgcc
cccatcggcaagggtcagcgcggcctcatcgtggcgcagcccaaaaccggcaaaacggtg
ctgctccaggaaatcgccaacgccatttcggaaaaccaccccgaggtgtatctcattatc
ctgctgatagatgagcgccccgaggaagtaaccgatatggcccgctcggtgaaggccgag
gtgctgtcttcgaccttcgacgaaatggctgaccgccacgtgaaaatcgcggaattggcc
ctcgacaaggcgcgccgcctcgtggagtgcggccacgacgtggtgattttgctcgactcg
attacccgcctggcgcgggcctacaataccgtgcagcccagcagctcgcgcatcctctcg
ggtggcattgatgccggcgcattgcaaaagcccaagcgcttcttcggcgcggcccgcaac
attgaaggccctggctccctgacgattatcgccaccgcgctcatcgaaaccggctcgaag
atggacgaggttatcttcgaagaatttaaaggtaccggcaacatggaattgcagcttgac
cgcaagctggccaacaagcgcgttttcccggctatcgacattccggcttccggcacccgc
cgcgaagacctgctaatgagccgcgacgagttgagccgcgtgtgggtgctccgcaaattc
atgaccgacatgagcgccaccgaggcaatggaattcctcaaggaccgcatgaaaggcacc
aaggacaacgaagagttcctgttggctatgaacgggtaa
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