KEGG   Hyphomicrobium sp. 1Nfss2.1: HNF_0308
Entry
HNF_0308          CDS       T11703                                 
Symbol
rnc
Name
(GenBank) Ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
hyph  Hyphomicrobium sp. 1Nfss2.1
Brite
KEGG Orthology (KO) [BR:hyph00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    HNF_0308 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hyph03019]
    HNF_0308 (rnc)
   03009 Ribosome biogenesis [BR:hyph03009]
    HNF_0308 (rnc)
   03036 Chromosome and associated proteins [BR:hyph03036]
    HNF_0308 (rnc)
Enzymes [BR:hyph01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     HNF_0308 (rnc)
Messenger RNA biogenesis [BR:hyph03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HNF_0308 (rnc)
Ribosome biogenesis [BR:hyph03009]
 Eukaryotic type
  90S particles
   RNase
    HNF_0308 (rnc)
 Prokaryotic type
  rRNA processing factors
   HNF_0308 (rnc)
Chromosome and associated proteins [BR:hyph03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     HNF_0308 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM RM44_endonuclase HrpE
Other DBs
NCBI-ProteinID: CAN1721321
LinkDB
Position
HNF:299788..300504
AA seq 238 aa
MILRPRKYKELEKALGHRFKDQQLIEVALTHASMRGGKTERADNERLEFIGDRVLGLVIA
QVLIERFPSANEGELARRFNRLVRGEACARVARALGIGPHLILSESEAGSGGRAKGTILA
DAIEAILGAVFLDGGFEAARAVVRNLWDSQYDDQHSTSAGPDAKSALQEWAQGKGLALPE
YIEVSRKGPDHAPRFTSEVRISGCAPARGEGTSKRAAEQAAARTLLEREGVAGAEVHE
NT seq 717 nt   +upstreamnt  +downstreamnt
gtgatcctgcgaccgcgaaaatacaaagagcttgagaaagcgctgggtcaccgcttcaag
gaccagcagctcatcgaggtcgcgctgactcacgccagcatgcgcggtggcaagaccgag
cgcgccgacaatgagcgcctggagttcatcggcgaccgcgtgctggggctggtgatcgcg
caggtactcatcgagcgctttccctcggcaaacgagggcgaactggcccgccgcttcaat
cgtctcgtccgcggcgaggcctgcgctcgggtcgcccgcgccctcggcattggcccccac
ctcatcctgtcggaaagcgaggccggcagcggcggcagggccaagggcaccatcctcgcc
gacgccattgaggccattctcggcgccgtcttcctcgatggcgggttcgaagcggcccgc
gcggtcgtccgcaatctctgggacagccaatacgacgatcagcattcgaccagcgccggc
cccgatgccaagtcggcgctgcaggaatgggcccagggcaaggggctcgctctgcccgaa
tatatcgaggtcagccgcaagggccccgatcatgcaccgcgtttcacctcggaagtgcgc
atcagtggttgcgccccggcccgcggcgagggaacgtcgaagcgcgccgccgagcaggcc
gccgcccgtaccctgcttgaacgcgaaggtgttgccggagccgaagtccatgaatga

DBGET integrated database retrieval system