Hyphomicrobium sp. 1Nfss2.1: HNF_1572
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Entry
HNF_1572 CDS
T11703
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
hyph Hyphomicrobium sp. 1Nfss2.1
Pathway
hyph00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hyph00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HNF_1572 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hyph01007
]
HNF_1572 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hyph03016
]
HNF_1572 (lysS)
Enzymes [BR:
hyph01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HNF_1572 (lysS)
Amino acid related enzymes [BR:
hyph01007
]
Aminoacyl-tRNA synthetase
Class I (A)
HNF_1572 (lysS)
Transfer RNA biogenesis [BR:
hyph03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HNF_1572 (lysS)
SSDB
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Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1b
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
CAN1722585
LinkDB
All DBs
Position
HNF:1511563..1513215
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AA seq
550 aa
AA seq
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MSSPVPAPTSALADAKAWPFEEARRLIKRLEKIKGGEEKAVIFETGYGPSGLPHIGTFGE
VARTSMVRHAFELLTEGKWPTRLICFSDDMDGLRKVPSNVPNQELLHAALEKPLTNVPDP
FGKFESFAHHNNAMLRDFLDRFGFSYEFMSATEAYKSGRFDETLLKMLHAYDKVMEIILP
TLGPERRATYSPFLPISPRTGKVLQVPMVERHPRKGTIVYIDPDSGEKVETPVTGGAVKC
QWKADWALRWTALDVDYEMAGKDLIDSVQLSSRICKALGGTPPEGFNYELFLDDRGEKIS
KSKGNGLTIDEWLKYASPESLALFMFQKPKTAKRLYFDVIPRAVDEYLQLLSAYGRQDDK
GKLDNAVWHIHTGNPPPANVPITFALLLNLVAASNADDKEVLWGFIRRHVKGVSPETHPL
LDEMAGYAVRYYADFVKPRKKYRHADDVETAALRALSDTLAAASPDATAEELQGLVYDVG
RSVPRYQDLNAKGATPERPGVSNAWFNAIYEVLLGEEKGPRFGSFIELYGINETRALIDK
ALAGELTKAT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctcccgtccctgccccaacctctgctctcgccgacgcgaaggcctggcccttc
gaggaggcgcgtcggcttatcaagcggctggagaagataaagggcggcgaggaaaaggcc
gttatattcgaaacgggctacggcccgtcgggcttaccgcacataggcactttcggcgag
gtcgcccgcaccagcatggtccgccacgctttcgagctgctgaccgagggcaagtggcca
acgcgcctcatctgtttctccgacgacatggacggcctgcgcaaggtcccctccaacgtc
ccgaaccaagagctgcttcacgcagctctcgaaaagccgctgaccaatgtgcccgacccg
ttcgggaagttcgaaagcttcgcgcatcacaacaacgccatgctgcgcgacttcctcgat
cgcttcggcttctcctacgagttcatgtcggcgaccgaggcctacaagtccggccgcttc
gacgagacgctcctgaagatgctccacgcctacgacaaggtcatggagatcatcctgccg
acacttggcccggagcgccgcgccacctattcgcctttccttccgatctcgccgcgcacg
ggcaaggtgttgcaggtaccgatggtcgaacgccatccgcgcaagggcaccatcgtctat
atcgatcccgactccggcgagaaggtggaaacccccgtcacgggcggcgcggtcaagtgc
cagtggaaggcggactgggccctgcgctggacagcgctcgacgtcgactacgagatggcc
ggcaaggacctcatcgactccgtgcagctctcatcacgcatctgcaaggctctcggcggc
accccgcccgaaggtttcaactacgagctgttcctcgacgacaggggcgagaagatctcc
aagtcgaagggcaacggcctgacgatcgacgagtggctgaagtacgcaagccctgaaagc
cttgcgctcttcatgttccagaagccgaagacggccaagcgcctttacttcgacgtcatc
ccgcgcgccgtcgatgaatacctgcagcttctttcggcatatggccgccaggacgacaag
ggcaagctggataacgccgtctggcatattcacaccggcaacccaccgcctgcaaatgtg
ccgatcacgttcgcgctcctgctcaacctagtcgccgcctccaacgccgacgataaggaa
gtgctgtggggcttcatccgccgccacgtcaaaggcgtcagccccgaaacacatccgctg
ctggacgagatggccggctatgccgtgcgctactacgccgacttcgtgaagccgcgtaaa
aagtaccgccacgccgacgacgtcgagactgccgccctgcgcgcgctgtccgacaccctt
gccgccgccagtccggacgcgaccgccgaggagctgcaaggcctcgtctacgacgttggc
cgctcggtgccgcgctatcaggatctcaacgccaaaggcgcaacgccagagcgtcccggc
gtttcgaacgcctggttcaatgccatctatgaagtattgctcggcgaagagaaggggccg
cgctttggcagcttcatcgagctctatggcatcaacgaaacacgtgcgttgatcgataaa
gcactcgccggcgagctgacgaaagcgacgtga
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