Hyphomicrobium sp. 1Nfss2.1: HNF_2398
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Entry
HNF_2398 CDS
T11703
Symbol
priA
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hyph Hyphomicrobium sp. 1Nfss2.1
Pathway
hyph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HNF_2398 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyph03400
]
HNF_2398 (priA)
Enzymes [BR:
hyph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HNF_2398 (priA)
DNA repair and recombination proteins [BR:
hyph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HNF_2398 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CAN1723407
LinkDB
All DBs
Position
HNF:complement(2355684..2357924)
Genome browser
AA seq
746 aa
AA seq
DB search
MQSLFEPLDGETRATPLKLAPVVLAVALDQTYDYIVPDDVEIEPGCFVMVPFGPQSRIGV
VWDRPVANLDGTPQKAIDPKKLKAITGRLDAPPLPPITMRFAEWIAKYTLAPLGMTVRMM
MSARAVFEPQKPRFGVTIVADAPEPPRMTPARKKALEIAGDGAIRAKAALAQAAECSSGV
IDGLVQSGNLVEVAIPERRPPVPDPKHRVTELSPEQAVAVNALQSAVDGGNFSVSLLDGV
TGSGKTEVYFEAVARTLECGHQALIMLPEIALTDQFMRRFTGRFGAMPVEWHSALSGPER
GRVWRQAANGEARVVVGARSALFLPFSDLGLVIVDEEHDAGYKQDDRVHYQARDMAVVRG
SLGGFPVILASATPSIESHVNARNGRYRHVVLPGRFSGASLPDITAIDLRVTPPEKGKWL
APPLVEAMIRTLEDKQQTLLFLNRRGYAPLTLCRACGHRIECPQCTATLVEHRFRGRLHC
HHCGFSIALPEKCPKCGEAGSLVACGPGVERVAEEVAERFPDAKVALLSSDLIPGLTEMR
EIIRNIEAGGIDIVIGTQIVAKGHHFPNLATVGIVDGDLGLAQGADPRAGERTFQLLHQV
TGRAGRALAEGRGYVQTHMPDHPVMAAIIESNREAFIEQEIKSRQRGMLPPFGRLVALVV
AARDKETAQLIARDIAHRAPRSDRIEVLGPAEAPIAVIRGRHRWRLLVKAPREIDVQAYL
RAWLADLPPLKGDVRLTVDIDPYSFL
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtttgttcgagcctttggatggcgagacgcgggccacgcctttgaagttggcg
ccggttgtgctcgcggtcgcgctcgaccagacgtacgactacatcgtgcctgacgatgtg
gagatcgagccgggctgcttcgtgatggtgccgttcggcccgcaaagccgcattggcgtg
gtgtgggatcggccagtcgccaacctcgacggcacgccgcagaaggcgatcgatccgaag
aagctgaaagcgatcacggggcggctcgatgcgccgccgctgccgccgatcacgatgcgg
ttcgcggagtggatcgccaaatacacgctggccccgctgggcatgacggtgcgcatgatg
atgagcgcgcgggccgtgttcgagccgcagaagccgcgcttcggtgtgacgatcgttgcg
gatgcgccagagccgccgcgcatgacgccggcacgcaaaaaggcgctggagattgcaggc
gatggcgcgatccgggccaaggcggcactggcgcaggcggcggagtgctcgtcaggtgtg
atcgacgggctggtgcagtcgggcaatctggtcgaggtggcaattcccgaaaggcggccg
ccggtgcctgacccgaagcatcgcgtgacggagctgagcccggaacaggcggtggcggtg
aacgccctgcaatcggcggtcgatgggggaaatttctccgtttcgctgctcgacggcgtg
acggggtcgggcaaaacggaagtctatttcgaggcggtggcacgcacgcttgagtgcggg
catcaggcgctgatcatgctgccggaaatcgcgctgaccgatcagttcatgcggcgcttc
acggggcggttcggcgcgatgccggtcgaatggcattcggcgctgtcggggccagagcgc
gggcgcgtgtggcggcaggcggcgaatggtgaagcgcgcgtcgtcgttggggcgcggtcg
gcgctgttcctgccgttttcagacctcggcctcgtcatcgtcgatgaagagcacgacgcc
ggctacaagcaggacgaccgcgtgcactatcaggcgcgcgacatggcggtggtgcgcggc
agtctcggcggcttcccggtgatcttggcctccgcgacgccttcgatcgaatcgcacgtc
aacgcgcgcaacgggcgctatcggcatgtcgtgctgccggggcggttttcgggcgcatcg
ctgccggacatcacggcgatcgatctgcgcgtgacgccgccggaaaagggcaagtggctg
gcgccgccgctggtcgaggcgatgatacgcacactggaagacaagcagcagacgctattg
tttctcaaccggcgcggatatgcgccgctaacgctgtgccgtgcgtgcggccatcgcatc
gagtgtccgcagtgcacggcgacgctggtggagcatcgttttcgcggccggctgcattgc
catcactgcggcttttccatcgcgttgccggagaagtgtccgaagtgcggggaagcggga
tcgctggttgcgtgcgggccgggcgtcgagcgcgttgcggaagaagtggcggagcggttt
ccggatgcgaaggtggcgctgctgtcgtcagatctcattccggggctgacggagatgcgc
gagatcatccgaaacatcgaggcgggcggcatcgatatcgtgatcggcacgcagatcgtt
gccaagggccatcacttcccgaaccttgcgacagtggggatcgtcgacggcgatctgggc
ctggcgcagggcgccgatccgcgcgcgggcgagcgcacgttccagctgctgcatcaggtg
acggggcgcgcggggcgtgcgctggcggaagggcgcggctacgtgcagacgcacatgccc
gatcatccggtaatggcggcgatcatcgagagcaaccgcgaagcattcatcgagcaggag
atcaaatcgcgccagcgcggaatgctgccgccgttcgggcggctggtggcgctggtggtc
gccgcgcgcgacaaggagacggcgcagctcatcgcgcgggacattgcgcatcgcgcgccg
cgttcggacaggatcgaggtgctggggccggccgaggcgccgattgcggtgatccgcggg
cggcatcgctggcggttgctggtgaaggcgccgcgcgagatcgacgtgcaggcttacctg
cgcgcgtggctggcggatctgccgccgctgaagggcgacgtgcggcttacggtcgatatc
gacccgtatagttttttgtag
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