Hyphomicrobium sp. 1Nfss2.1: HNF_3080
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Entry
HNF_3080 CDS
T11703
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
hyph Hyphomicrobium sp. 1Nfss2.1
Pathway
hyph03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hyph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HNF_3080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyph03400
]
HNF_3080
Enzymes [BR:
hyph01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
HNF_3080
DNA repair and recombination proteins [BR:
hyph03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HNF_3080
Prokaryotic type
HNF_3080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_3
HHH_8
Motif
Other DBs
NCBI-ProteinID:
CAN1724089
LinkDB
All DBs
Position
HNF:3014080..3015186
Genome browser
AA seq
368 aa
AA seq
DB search
MTAVARKQLPLRPAGPDTVDALLAWYDDERRDLPWRVAPGKRANPYRVWLSEIMLQQTTV
KAVIPFYLRFLVRWPTVEKLAAAPLDDVLAAWAGLGYYSRARNLHKCAVVVATELGGKFP
STVAELQRLPGIGPYTANAIAAIAFGEAATPVDGNVERVVARLFAVRQPLPTAKTELKRL
AATLTPPRRAGDFAQAMMDLGAGICTPKRPSCLVCPVQQDCAASAHGIAEQLPMRLERAE
RPQRVGYAFVALREDGHVLLRKRAEAGLLGGMLEVPGTHWGDLLPPVKEALRTAPVRADW
WAVPGTVVHVFTHFRLEVVVYRALVPNNATLNFWAEPDRCRWVARRDMHGAAIPSVMRKI
ISHALSET
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
ttgactgctgttgcgagaaagcaactgccgctacggccggccggccccgatacggtggac
gcgctgctcgcttggtatgacgacgagcgccgcgatctgccatggcgcgtcgcccctgga
aagcgcgccaatccctaccgcgtctggctcagcgagatcatgctgcagcagaccacggta
aaggccgtcatcccgttctacctacgctttctcgtccgctggccgactgtggaaaaactc
gccgccgcgccgctcgacgacgttctcgccgcctgggccggcctcggctactacagccgc
gcccgcaatctgcataagtgcgcggtcgtcgtcgccaccgagctcggcggcaaattccca
tccaccgtcgccgaactgcagaggctgcccggcatcggcccctacacagccaacgccatc
gcagccatcgccttcggtgaggcggcaactccggtcgatggcaacgtcgagcgcgtcgtc
gcgcgcctcttcgccgtgcgccaaccgctgcccacggcgaaaaccgaactgaagcgcctc
gccgcgaccctcaccccgccgcgccgcgccggcgattttgcgcaggccatgatggatctg
ggcgcgggcatctgcacgcccaagcgtccatcgtgtctcgtttgtcccgtgcagcaggac
tgcgccgcttcggcccacggtatcgccgagcaattgccgatgcgcctcgagcgcgccgag
cgtccgcagcgcgtcggctacgctttcgtcgccctgcgtgaggatggccatgtgctgctg
cgcaagcgcgccgaagccggtcttttaggcggaatgctggaagtacccggaacccactgg
ggcgaccttcttcctccggtaaaagaggcgctccgcaccgcgcccgtgcgcgctgactgg
tgggcggtgccgggcacggtggtgcacgtcttcacccacttccggctggaggtcgtcgtc
tatcgcgctctggtgccgaataatgcaacgctgaacttctgggccgagcccgatcgctgc
cggtgggtggcgcgacgcgacatgcacggcgccgccattcccagcgtcatgcgcaagatc
atctcccacgccttgagcgagacctag
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