Hyphomicrobium sp. 1Nfss2.1: HNF_3385
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Entry
HNF_3385 CDS
T11703
Symbol
rluD
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
hyph Hyphomicrobium sp. 1Nfss2.1
Brite
KEGG Orthology (KO) [BR:
hyph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyph03009
]
HNF_3385 (rluD)
Enzymes [BR:
hyph01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
HNF_3385 (rluD)
Ribosome biogenesis [BR:
hyph03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HNF_3385 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CAN1724394
LinkDB
All DBs
Position
HNF:complement(3318585..3319601)
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AA seq
338 aa
AA seq
DB search
MSDRLEEHHAGLVELQVGEAEAGSRLDKLLAQRVTTLSRARIQALIRSGNVAGPGGGTIG
DGSYRVKPGETFTINVPEAEPAEPEGEDIALDVVYEDGDVIVINKPAHLVVHPAAGHSSG
TLVNALIAHCGASLSGIGGVKRPGIVHRLDKGTSGLLVVAKNDAAHKALSEQFAAHGADD
KMHRAYLALVWGKPLRPRGVISARLDRSRSNRTKIAVVTGESGRHAVTHYEVLKTFNTPA
GEVSLLRLELETGRTHQIRVHLAHIGHPVLGDATYGSGFKAKTTKLSEKALAALVALHRQ
ALHAAELGFEHPRTKKPMAFEAPLPGDMEALLEALSCD
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcgtctcgaagaacaccacgcgggcctcgtcgagctccaggtgggtgaagcg
gaagccggcagccgcctcgataaactgctcgcccagcgcgtcacgacgttgagccgcgcg
cggattcaggcgctgatccggtctggcaacgtggccggcccgggcggggggaccatagga
gacggctcctacagggtcaaaccgggggaaacgttcaccatcaacgtcccggaagcggaa
ccggcggagcctgaaggcgaggatattgcgctcgatgtcgtctatgaggatggcgacgtg
atcgtcatcaacaagccggcgcatctggtggtgcatcccgccgccggccacagcagcggc
accttggtgaacgcgctgatcgcgcattgcggtgcgagcctgtcgggcattggcggcgtg
aagcggccgggcatcgtacatcggctcgacaagggcacgtcggggctgctcgtcgtcgcc
aagaacgatgccgcgcacaaggccctgagcgaacagttcgccgcgcacggcgccgacgac
aagatgcaccgcgcgtatctggcgctggtgtgggggaaaccgttgcgtccgcgcggcgtt
atctcggcacggctcgaccgcagccgttccaaccgcacgaagatcgcggtggtgacgggc
gagagcgggcggcacgcggtgacgcactacgaagtgctgaagacattcaatactccggcg
ggtgaggtgtcactgctccgcctggaactagaaacggggcgcacgcatcagattcgcgtg
catcttgcgcacatcggacatccggtgctcggcgatgcgacctacggcagcggcttcaag
gcgaagacgactaagttgagcgaaaaggcgcttgcagctctggttgcgctgcatcggcaa
gcgttgcacgccgccgaactcgggttcgagcacccaagaacgaagaagccgatggcgttc
gaggcgccgttgccgggagatatggaggcgctactcgaagcgctctcgtgcgattag
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