Hyphomicrobium sp. 1Nfss2.1: HNF_3737
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Entry
HNF_3737 CDS
T11703
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
hyph Hyphomicrobium sp. 1Nfss2.1
Pathway
hyph03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hyph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HNF_3737 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyph03400
]
HNF_3737 (uvrB)
DNA repair and recombination proteins [BR:
hyph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HNF_3737 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HNF_3737 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_30
AAA_22
Kinesin
Microtub_bd
DUF87
Motif
Other DBs
NCBI-ProteinID:
CAN1724746
LinkDB
All DBs
Position
HNF:complement(3633384..3636551)
Genome browser
AA seq
1055 aa
AA seq
DB search
MPPPPKDPDKTPKPRPSRVRSGKPTPPPAETAAGTPEVRARGRAGRKPQTANAADAARAE
GTEAPGMGESPQAVFDSLRALAFPHAQHPASAPHAASAPHPGPLPVETARADRPAYDGEA
EHKPLPALRQQGPRPPFGGESLGQYLNALLAKPEQRSEQARQILLSQPMLAAHPLVSGDE
LAFTPHRPPRPEKSEGGIAFNIVSEYEPKGDQPTAIRDLIDGINQTERSQVLLGVTGSGK
TFTMAKVIEGTQRPALILAPNKTLAAQLYGEMKSFFPDNAVEYFVSYYDYYQPEAYVPRT
DTYIEKESSINEQIDRMRHAATRALLERDDVIIVASVSCIYGIGSVETYTAMTFTVQVGE
RLSRDQLIADLVALHYRRNDVNFMRGTFRVRGDTIELFPAHLEDRAWRISLFGDDVESIV
EFDPLTGQKADELSLVKIYSNSHYVTPKPTLQQAIKSIKTELKQRLEELYANGKLLEAQR
LEQRTLFDMEMMEATGSCAGIENYSRYLTGRRPGDPPPTLFEYLPDDALVFVDESHVTVP
QIGAMFRGDYRRKATLAEYGFRLPSCMDNRPLRFEEWDAMRPQTAFVSATPGTWEMEETG
GAFVEQVIRPTGLTDPDVIIRPAKTQVDDLLFEAKETAKRGYRTLVTTLTKRMAEDLTEY
MHEAGIRVRYMHSDIETLERIEIIRDLRLGAFDVLIGINLLREGLDIPECALVAILDADK
EGFLRSETSLVQTIGRAARNVDGRVILYADNMTGSMERAIAETNRRREKQVAYNTEHGIT
PASIKRNIQDVLSSVYEQDHVTVDTGLADAPMVGHNLATIIEDMERRMHEAAADLEFETA
ARLRDEIKRLRETELAVSDDPLARQAEVEDRAGAFKGERKYGGAPKDGGAPGGSLPHQGG
ERSGSRIATEYQPVQPTHAQQSAVPLQTRARKPSLDNMGPGTDRAVPRREAASGQAAAGP
EARPRGEPAPDGVDQPASDISARAPKVDAREKAGAFGEHVRGPHKPTLDEMGPHAMLPPK
GGTPPQKPARTVEIQTEAEKKSRRGRPRKTGRPGH
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctcccccgaaggatcccgacaagacacccaagccgcgcccctcgcgcgtgcgc
tccggcaagccgacgcctccaccagcggagaccgcggcgggcactccggaggtgcgggcg
cgcggcagggccggccgcaagccgcagaccgccaatgccgcggacgctgcgcgggctgaa
ggcactgaagcgccaggcatgggcgaatccccgcaggcggtgttcgacagtctcagggct
cttgcattccctcatgcgcagcacccagcttctgcccctcacgcagcttctgcccctcac
cctggccctctccccgtcgaaacggcgagagcggatcggcccgcctacgatggcgaggcg
gagcacaagccgctgccggcgctgcgtcagcaggggccgcgaccgccgttcggcggcgaa
tctttagggcagtacctcaacgcgctgctggccaagccggagcagcgatccgagcaggcg
cggcagatcctgctgagccaaccgatgctggcggcgcatccgctcgtctcgggcgatgaa
ctcgcgttcacaccgcatcggccgccgcgcccggagaagtccgaaggcggcatcgcgttc
aacatcgtttccgagtacgagccgaagggcgaccagccgacggccatccgcgatctgatc
gacgggatcaaccagaccgagcgcagccaggtgctgctgggcgtgaccggctcgggcaag
acgttcaccatggcgaaggtgatcgagggcacgcagcggccggcgctgatcctggcgccg
aacaagacgctggcggcgcagctctacggcgagatgaagagcttcttcccggacaacgcg
gtcgagtacttcgtgtcgtactacgactactaccagccggaagcgtatgtgccgcgcacc
gacacgtacatcgagaaggaatcgtcgatcaacgagcagatcgaccgcatgcggcacgcg
gcgacgcgcgcgctgctggagcgcgatgacgtgatcatcgtggcgtcggtgtcgtgcatc
tacggtatcggctcggtggagacgtatacggcgatgacgttcacggtgcaggtgggcgag
cggctgtcgcgcgaccagctgatcgccgatctcgtcgccctgcactaccggcgcaacgat
gtgaacttcatgcgcggcaccttccgcgtgcgcggcgacaccatcgagctgttcccggcg
catttggaagatcgcgcctggcgtatctctctgttcggcgatgacgtggagagcatcgtc
gagttcgatccgctgacggggcagaaggcggacgagctgtcgctcgtgaagatctattcc
aactcgcactacgtgacgccgaagccgacgctgcagcaagcgatcaagtcgatcaagacg
gagctgaagcagcggctggaagagttgtatgccaacggcaagctgctggaggcgcagcgg
ctggagcagcgcacgctgttcgacatggagatgatggaagcgacgggctcgtgcgcgggc
atcgagaactattcgcgctatctcaccggacgccggccgggcgatccgccgccgacgctg
ttcgagtacctgcccgatgatgcgctggtattcgtcgacgagagccacgtgacggtgccg
cagatcggcgccatgttccgcggcgactaccggcgcaaggcgacgctggccgaatacgga
ttccgcctgccctcgtgcatggacaatcgtccgctgcggttcgaggaatgggacgcgatg
cgcccgcagacggcgttcgtttcggcgacgccgggcacgtgggagatggaggagacgggc
ggggcgttcgtcgagcaggtcattcgcccgaccggcctcaccgatccggatgtgatcatc
cggccggcgaagacgcaggtcgacgatctattgttcgaggcgaaggagacggctaagcgc
ggctatcgcacgctggtgacgacgctgaccaagcgcatggcggaggacctcaccgaatac
atgcatgaagcgggcatccgcgtgcgttacatgcactcggacatcgagacgctggagcgt
atcgagatcatccgcgatctgcggctcggcgcgttcgacgtgctgatcggcatcaacctc
ttgcgcgagggcctcgacattccggagtgcgcgctggtcgccattctcgatgccgacaag
gaaggcttcctgcgttcggagacgtcgctggttcagacgatcgggcgcgcggcgcgcaac
gtggacgggcgcgtgatcctttatgccgacaacatgaccggctcgatggagcgcgcgatt
gcggagaccaaccgccgccgcgagaagcaggtggcgtacaacaccgagcacggcatcacg
ccggccagcatcaagcgcaatatccaggacgtgctctcctcggtctacgagcaggatcac
gtgacggtcgataccggcctcgccgatgcgccgatggtgggacacaacctggcgacgatc
atcgaggacatggaacggcgcatgcacgaggccgcggccgacctcgagttcgagacggcg
gcgcggctgcgcgatgagatcaagcgcctgcgcgagacggagctcgcggtgtcggacgat
ccgctggcgcggcaggcggaagtggaagacagggctggcgccttcaagggcgagcgcaag
tacggcggcgcgccgaaggacggcggcgcccccggtggttccctcccccatcaaggggga
gagagaagtgggtcgcgcattgcaaccgagtatcagccggtgcagccgacgcacgcgcag
cagagcgcggtgccgctgcagacgcgtgcgcgcaagccatcgctcgacaacatgggcccg
ggcaccgaccgcgccgtccctcgccgcgaagcggcaagcggccaagcggccgccgggccc
gaggcccgcccccgcggagagcccgcgccggatggcgtggatcagcccgcgagcgatatc
agcgcgcgggcgccgaaggtcgatgcacgcgagaaggccggcgcgttcggagaacatgtg
cgcgggccgcacaagccgacgctagacgagatggggccgcacgcgatgctgccgccgaag
ggcggaacgccgccgcagaagccggcgcgcacggtggagattcagaccgaggccgagaag
aagagccggcgcggccgcccgcgcaagacgggccggccggggcattga
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