Hyphomicrobium sp. 1Nfss2.1: HNF_4053
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Entry
HNF_4053 CDS
T11703
Name
(GenBank) pilus assembly protein CpaC
KO
K02280
pilus assembly protein CpaC
Organism
hyph Hyphomicrobium sp. 1Nfss2.1
Pathway
hyph02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hyph00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HNF_4053
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hyph02044
]
HNF_4053
02035 Bacterial motility proteins [BR:
hyph02035
]
HNF_4053
Secretion system [BR:
hyph02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
HNF_4053
Bacterial motility proteins [BR:
hyph02035
]
Pilus system
Pilus assembly proteins
HNF_4053
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
BON
DUF7206
Motif
Other DBs
NCBI-ProteinID:
CAN1725062
LinkDB
All DBs
Position
HNF:complement(3946978..3948663)
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AA seq
561 aa
AA seq
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MGTTLKWVRTSVAAVWLVASGFGNVDAADLTGKLEAAAAGPARQDSVLRIPANAAFPMTK
RLDLGIGRSTVVQFPVPLKDVLISDPKILDAVVQSSDRVFLIAKGTGQTNAFFFDEYGQQ
ILTIDVAIGADLSALDQLLARLIPGSSVRSEIAGRAVVLTGSVRTPIDSDRAAQIAAQFV
QANAEVGSIVNTNAPSASNSSTTSSSTTVGGGYQSATTDSGGGSNSDAANVYGGKPIINL
ISVEGEEQVMLRVSVAEVQRTILKQFGVNIGAAVNSGNFSTSVLTSNSLPLTGATLGTLP
TSGIGSTGAATGALQLLNSSSSSDAFSNSGIAMSWQSGNQAVNGALRAMERDGLMRILAE
PNLTAVSGEPAKFLAGGEYPVPIVDSLGQVSVTYKEYGIGLAFTPVVLSEGRISLKIESE
VSELSSDGAVVLSGIEIPALKKRQAKSTVELPSGGSIALAGLLSEDSRQNIDGFPTLKDL
PILGTLFRSRDYQRSETELVIIVTPYMVRPVARQELARPLDGLADPTDAKANFLGQINRI
YGGGRPAPVGDLKGDYGFIVE
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgaccctgaagtgggtgcgcacgtctgtggctgcagtctggctcgttgcgtcg
ggcttcggcaacgttgacgctgcggatctgacgggcaaattggaggcggcggctgcgggg
cctgcacggcaggattccgtcttgcgcattccggccaatgccgcctttccgatgacgaag
cgactcgatctcggcatcgggcgctcgactgtcgtgcagtttcccgttccgctgaaggat
gtcctcatctctgacccgaagatcctcgacgcagtcgtgcagtcgtccgatcgcgtgttc
ctcatcgccaaggggactggacagaccaacgccttcttcttcgacgagtacggtcagcag
atcctgacgatcgatgtcgcgatcggtgccgacctctcggctctcgatcaactgctcgcc
cggctgatccccggctcaagcgtccgaagcgagatcgcaggtcgcgccgtcgtgctcacc
ggcagcgtgcgcacgcccatcgattcggaccgtgcggcccagatcgcggcgcagtttgtt
caggcaaatgccgaagtcggcagcatcgtcaacaccaatgcgccgagtgcctccaatagt
tcgacgacatcgagctcgaccaccgtcggcggcggctatcagtcggcgaccaccgattcc
ggtggcggctctaattcggatgctgccaacgtctacggtggcaagccgatcatcaacctc
atctctgttgagggtgaggagcaggtcatgttgcgcgtttccgtcgctgaggtgcaacgc
acgatcctcaagcagttcggcgtcaatatcggtgctgccgtcaactcgggaaacttcagt
acgtcggtgcttacatcaaacagcctacctctcaccggagccacactcggtaccctcccc
acgtccggcataggatcgacaggagccgcgactggcgcactgcagctcctcaattcatcg
agcagcagtgatgccttcagcaactctggcatcgcgatgtcctggcagtcgggcaatcag
gccgtaaacggagccctgcgggccatggaacgcgacggtctgatgcggattctggctgag
ccaaatctcacggctgtatccggcgagcctgccaagtttctcgctggcggcgagtacccg
gtgcccatcgttgatagcttggggcaggtcagcgtcacctataaggagtacggcatcggc
ctcgcattcacccctgtggttctttccgagggccgcatcagcctcaagatcgaaagcgag
gtgagcgagctcagcagcgacggagccgtggtgctatctggcatagagataccggcgttg
aagaagcgccaagccaaatcaacagtcgagctaccatcggggggctccatcgcactcgcc
ggacttctgtcggaggattcgcgccagaacatcgatggcttcccgaccctgaaggatctt
cccattctcggcactctcttccgcagccgtgactatcagcgttcggagacggagcttgtc
atcatagtgacgccgtacatggtgcgcccagttgcgcgccaggagttggcgcggcctctg
gatggcttggcagatccgacggatgcaaaggccaactttctcggtcagataaaccgcatc
tacggtggcggacgtccggcgccggtcggcgacctcaagggtgactacgggttcatcgtc
gaatga
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