Hymenobacter latericius: OIS50_05520
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Entry
OIS50_05520 CDS
T11505
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
hyq Hymenobacter latericius
Pathway
hyq03030
DNA replication
hyq03430
Mismatch repair
hyq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OIS50_05520 (holA)
03430 Mismatch repair
OIS50_05520 (holA)
03440 Homologous recombination
OIS50_05520 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyq03032
]
OIS50_05520 (holA)
03400 DNA repair and recombination proteins [BR:
hyq03400
]
OIS50_05520 (holA)
Enzymes [BR:
hyq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OIS50_05520 (holA)
DNA replication proteins [BR:
hyq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OIS50_05520 (holA)
DNA repair and recombination proteins [BR:
hyq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OIS50_05520 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
UYZ60260
LinkDB
All DBs
Position
1:complement(1236105..1237160)
Genome browser
AA seq
351 aa
AA seq
DB search
MPQLSADQIMQQLQKRQFAPVYFLQGEEPYYIDLVSDFIEKNVLSEADKGFNQVVLYGKD
TDIPTVLGQARRFPMMAERTVVIVKEAQNLPGLEADAGQTMLEAYLKNPLPSTVLVLAHK
HKCLDGRKKLGKIMAEHAVLLTSDKLRDYQVPQWLQATMKQRQRPIHDEAVQLLSEYIGA
DLGRLLGEIQKMELNLQPGQPIDAATVQRMVGISKDYNIFELQKALIMRDVLKANRIVQH
FALNPKDNPLIPNLTLLFNFFLRLLQLHTLPNPSPADWKKIGVANSYAQKEYQQALKVFP
YQRTRDIIRLIRRADLQSKGVESGSMSEADILQELVFMILHPQVPVAAVLG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagctctccgccgaccaaatcatgcagcagctgcagaagcggcagtttgcgccg
gtgtactttctgcaaggcgaagagccgtattacatcgatctggtatccgacttcatcgag
aagaacgtgctgagcgaggccgacaagggtttcaaccaggtggtgctctacggcaaggac
accgacatacccaccgtgctggggcaggcgcgccgctttccgatgatggccgagcgcacg
gtggtaattgtgaaggaagcccagaacctgcccggtctcgaagccgacgcgggccaaacc
atgctggaggcgtacctgaaaaacccgctgcccagcaccgtgctggtgctggcccacaag
cacaagtgcctcgacggccgcaagaaactcggcaaaatcatggccgagcacgccgtgctg
ctcacctccgataagctgcgcgactaccaggtgccgcagtggctgcaggctaccatgaag
cagcgccaacggcccatccacgacgaggccgtgcagctgctgagcgagtacatcggtgcc
gacttagggcgcttgctgggcgaaatccagaagatggagctgaacctgcagcccggccag
cccatcgacgcggctaccgtgcagcgcatggtaggcatcagcaaggactacaacatcttc
gagctgcagaaggccctcatcatgcgcgatgtgctgaaagccaaccgcattgtgcagcac
tttgccctcaaccccaaggataatccgcttattcccaacctcacgctgctgttcaacttc
ttcctgcgcctgttgcagctgcacactctgcccaacccctcgccagccgattggaagaag
attggcgtggccaacagctacgcccagaaagagtaccagcaggccctgaaggtgtttccg
taccaacgcacccgcgacattattcgcctgattcgccgcgccgatttgcagagcaaaggc
gtggagtcgggctcgatgtcggaggcggatattctgcaggagttggtgtttatgatactg
cacccgcaggtgcccgttgcggcggtgctggggtag
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