Hymenobacter latericus: OIS50_05580
Help
Entry
OIS50_05580 CDS
T11505
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hyq Hymenobacter latericus
Pathway
hyq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hyq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OIS50_05580 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyq03019
]
OIS50_05580 (pnp)
03016 Transfer RNA biogenesis [BR:
hyq03016
]
OIS50_05580 (pnp)
Enzymes [BR:
hyq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OIS50_05580 (pnp)
Messenger RNA biogenesis [BR:
hyq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OIS50_05580 (pnp)
Transfer RNA biogenesis [BR:
hyq03016
]
Prokaryotic type
tRNA degradation factors
OIS50_05580 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
KH_2
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
UYZ60270
LinkDB
All DBs
Position
1:complement(1249812..1252064)
Genome browser
AA seq
750 aa
AA seq
DB search
MSPYNAVTKNITLPDGRQISIETGKLAKFADGAVVVRLGDAMLLATVVSQPSQREGVDFL
PLSVDYQEKFGGAGKIPGSFQRREGRLSDYEVLVSRLVDRILRPMFPKDYHYEVQVMISL
ISADKDVQPDALAALAASAALSVSDIPFAGPISEVRVARIDGQLQINPKTSDIERADIDL
IVGATIDSVAMVEGEMNEVSEEEMVEAIAFAHEAIKEQIRVQQELGAAVEKSHVKREYPK
YDENEELKQRVYDAVYQQAYEVAKSGNTSKAGRKESFSAIKKPLLEQLLAENPELDLKMF
GRYYGSAEKKAIRDMMIKERTRLDGRQLTEIRPIWSEVNYLPGAHGSALFTRGETQSLTS
VALGTKLDEQIVDSAMVSGYNKFMLHYNFPAFSTGEVKPNRGPGRREVGHGNLAMRSIKK
VLPSEEENPYTIRVVSDILESNGSSSMATVCASSMALMDAGIKLKAAVSGIAMGLVQDKE
TGEYAVLSDILGDEDHLGDMDFKVTGTEKGIVACQMDIKIQGLSNEILTKALHQAREGRL
HILGEMAKTISAPAEDMKPHTPRSTKILVDKEYIGAIIGPGGKVVQQIQKDTNATITIEE
KDEKGHVYIYTSNANDMAAAVSRIRGIAATPEVGETYDGTVRSIQAYGAFVEFMPGKDGL
LHISEVSYDRLPSLDGVLQVGQEVKVQLVEVDKKTGKFRLSMKSLLPKPEGYVEPSERPE
RSERPDRGPRPDRGPRPERGERSERPQGNR
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtctccttacaacgcggttaccaaaaacatcaccctgccggacggtcggcagatttcc
atcgaaacaggtaaactggccaagtttgccgacggtgcagtagtagttcgcctcggcgac
gccatgctgctggccacggtggtttcgcagccctcgcagcgcgaaggcgtcgacttcctg
ccgctatcggtggattaccaggagaaattcggcggtgccggcaagatccccggttcgttc
cagcgccgcgaaggccgcctgtcggattacgaagtgctggtatcgcgcctcgttgaccgc
atcctgcgcccgatgttccccaaggactatcactacgaggtgcaggtgatgatttcgctg
atttcggccgacaaagacgttcagcctgacgcgctggccgcgctggctgcctcggctgcg
ctgtcggtttcggacattccttttgccggccccatctcggaggttcgcgtagcccgcatc
gacggccagctgcagatcaaccccaagacttcggacatcgagcgtgccgacatcgacctc
attgtgggggctaccatcgattcggtggccatggtggaaggcgagatgaacgaagtgagc
gaggaagaaatggttgaggccattgctttcgcccacgaagccatcaaagaacagattcgg
gtgcagcaggagctgggcgccgccgtggagaaatcccacgtgaagcgcgagtaccccaag
tacgacgaaaacgaggagctgaagcagcgcgtgtacgacgcggtgtaccagcaggcctac
gaggttgccaaatcgggcaacaccagcaaggccggccgcaaggagtcgttctcagccatt
aagaagccgctgctggagcagctgctggccgaaaaccccgagctggacctgaagatgttc
ggccgctactacggctcggccgagaagaaggccatccgcgacatgatgatcaaggagcgc
acgcgcctcgatggtcgtcagctgacggagattcgcccgatctggagtgaggtaaattac
ctgcccggtgcgcacggctcagccctgttcacgcgcggcgaaacccagtcgctcacttcg
gtggccctaggtaccaagctcgacgagcagattgtggactcggccatggtgtcgggctac
aacaagtttatgctgcactacaacttcccggccttctcgaccggcgaggtgaagcccaac
cgcggccccggccgccgcgaggttggccacggcaacctggccatgcgctcgatcaagaag
gtgttgccttcggaggaggagaacccctacacgatccgcgtagtatcggacatcctggag
tcgaacggctcttcatcgatggctacggtttgcgcttcgtcgatggccctgatggacgcc
ggtattaagctgaaggctgccgtatcgggtattgccatgggtctcgtacaggacaaagaa
accggcgagtacgctgtactgtcggacatcctgggcgacgaagaccacctcggcgacatg
gacttcaaagtgaccggcacggagaagggcatcgtggcttgccagatggacatcaaaatc
cagggcttgtcgaacgaaatcctgaccaaggcgctgcaccaagcccgcgaaggccgcctg
cacatcctgggcgaaatggctaagaccatcagcgctccggccgaagacatgaagccgcat
acgccccgctcgaccaaaattctggttgacaaggagtacatcggcgccatcatcggcccg
ggtggcaaagtggtgcagcagatccagaaggataccaacgccaccatcaccattgaggag
aaggacgagaagggccacgtgtacatctacacctcgaatgccaacgacatggccgctgcg
gtaagccgcatccgcggcattgccgctacgcccgaggttggcgaaacgtacgacggcacg
gtgcgctcgattcaggcttacggcgcctttgtggaattcatgcccgggaaagacggcttg
ctccacatttcggaagtaagctacgaccgcctgccctcgctcgacggcgtgctgcaggtg
ggccaggaagtgaaagtgcagctggtggaggttgacaagaagacgggcaagttccgtttg
tcgatgaagagcctgctaccgaagcccgaaggctacgtagaacccagcgaacggccggag
cgctcggagcgccccgatcgtggaccgcgccccgaccgggggccgcgtccggagcgtggt
gagcggtcggagcgtcctcagggcaaccgttaa
DBGET
integrated database retrieval system
