Hymenobacter latericus: OIS50_05670
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Entry
OIS50_05670 CDS
T11505
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hyq Hymenobacter latericus
Pathway
hyq03030
DNA replication
hyq03430
Mismatch repair
hyq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OIS50_05670
03430 Mismatch repair
OIS50_05670
03440 Homologous recombination
OIS50_05670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyq03032
]
OIS50_05670
03400 DNA repair and recombination proteins [BR:
hyq03400
]
OIS50_05670
Enzymes [BR:
hyq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OIS50_05670
DNA replication proteins [BR:
hyq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OIS50_05670
DNA repair and recombination proteins [BR:
hyq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OIS50_05670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
DUF7508
DNA_pol_A_exo1
RNase_H_2
DUF3788
Motif
Other DBs
NCBI-ProteinID:
UYZ60284
LinkDB
All DBs
Position
1:1272875..1274350
Genome browser
AA seq
491 aa
AA seq
DB search
MYAIIDLETTGGQPTQDRITEIAIFIHDGEKVVDSYTTLLNPGRPIPFYIQQLTGITDEM
VRDAPQFHEVAKKVVQMTEGCVFVAHNVRFDYSFLKKEFADLGYTYSRKTLCTVRLSRSL
IPGQPSYSLGKLCANIGIELNNRHRAFGDAEATAILFDRLLKISQVAEAPGYEAAAPADK
LAAVDAAAPSGRPQKQPAPRKVAAVQQAIRTALLPPLITPEKVASLPQEAGVYYFHDEHG
EVIYVGKSINIYKRIQQHFAVDYKSRKSLEFKNSIADITWELTGSELVALLHESAEIKRL
KPQYNRAQRRSVFPAGIYLRVDENGYKRLYYGRADARNSEIPIIALGNQFKAKGFLYHKV
AKYNLCQKMCDLYKTTSSCFDFQVHRCKGACVGLEPPEEYNARVDEAIESITYEHQTFVI
IGQGRRAGERSVVVIEHGRYLGFGYIDETFTARRFEAFKDVIKSQVDNKDVQQIIRQYMR
SKHKDKVKVFA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgccatcatcgacctagaaaccaccgggggccagcccacgcaggaccgcatcacc
gaaatagccattttcattcacgatggcgagaaggtggtcgattcctacaccaccctgctc
aaccccggccgtccgatccccttctacatccaacagctcacgggcatcaccgacgagatg
gtgcgcgatgccccgcagtttcatgaggtagccaagaaggtggtgcaaatgacggagggc
tgcgtgttcgtggcccacaacgtgcgcttcgattactcttttctgaaaaaggagtttgcc
gacctagggtacacctactcgcgcaaaacgctgtgcacggtgcgcctcagccgctcgctg
atacccggccagcccagctacagcctgggcaagctgtgcgccaacatcggtattgagctg
aacaaccggcaccgcgccttcggcgatgccgaggccaccgccattttgttcgaccgcctg
ctgaagatcagccaggtggccgaagcgcccggttacgaggctgccgcgccggccgataag
ctggccgccgtggatgccgccgccccgagcggccgcccgcaaaagcagcccgccccgcgc
aaggtggcggccgtgcagcaggccatccgaacggcgttgctgccgccgcttatcaccccc
gaaaaagttgcctcgctgccgcaggaggccggcgtgtactacttccacgacgagcacggc
gaggtgatttacgtgggcaaaagcatcaacatctacaagcgcattcagcagcacttcgcc
gtcgattacaagtcgcgcaaatcgttggagtttaagaactccattgccgacatcacctgg
gagctgacgggctcggagctggtggctttgctgcacgagtcggcggagattaagcgcctg
aaaccgcagtacaaccgggcccagcgccgctcggtgtttccggcgggcatttacctgcgc
gtggacgagaacggctacaagcgcctgtactacggccgcgccgacgcccgcaacagcgaa
attcccattattgccctaggcaaccagtttaaggccaagggtttcttgtaccacaaggtg
gccaagtacaacctgtgccagaagatgtgcgacctgtacaaaaccaccagctcgtgcttc
gactttcaggtgcaccgctgcaaaggcgcgtgcgtgggcctggagccgcccgaagagtat
aacgcccgcgtggatgaggccatcgagagcatcacctacgagcaccagactttcgtgatt
atcgggcaggggcggcgcgccggcgagcggtcggtggtggtcatcgagcacggccgctac
ctagggttcggctacatcgacgagacgtttaccgcccggcgcttcgaggcgttcaaggat
gtgatcaagtcgcaggtggacaacaaagacgtgcagcagatcatcaggcaatacatgcgc
tccaagcacaaggataaggtgaaggtgtttgcctag
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