Hymenobacter latericus: OIS50_12105
Help
Entry
OIS50_12105 CDS
T11505
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
hyq Hymenobacter latericus
Brite
KEGG Orthology (KO) [BR:
hyq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hyq01011
]
OIS50_12105
Enzymes [BR:
hyq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
OIS50_12105
Peptidoglycan biosynthesis and degradation proteins [BR:
hyq01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
OIS50_12105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM2_CERK1_LYK3_4_5
HTH_Tnp_1
MOV-10_N
Motif
Other DBs
NCBI-ProteinID:
UYZ57806
LinkDB
All DBs
Position
1:2723467..2725512
Genome browser
AA seq
681 aa
AA seq
DB search
MKRTFRASALLLLAAAFARPVAGQTQVPPIAPPEAGTDFDSTQVQLELAPDSLVAEPVLS
PEKLAWMQTPPAMRDLVGDRLSCIDSDMPLVFNNVVMSHVTFFTQRNRTYMQRVLERENL
YFPLFEKYLAKYNLPQDLKYLAVVESALIPTAKSRVGATGLWQFMGPTAGDLRLRRDDWV
DERMDPEKATEAACKHLRFLYGMLHDWELVLAAYNWGPGNVQRVMRRTGKRNYWDLHPHM
PQETRNYVPSFTAILYAMKYAQQHNLHAPDLRYQYAQPMDTLQIGGRAFDVARLGQAAGL
DSVALLRMNPELRKTYLPEGYRPYAVKFPASARPLLQQVDRATLFGYCLPQATLPQPIAA
LPPRLQGIEPFPSALAANSNNAPKNTKREVGAVAEAPRTRRKVHTVRKGQTLGELAEWYG
VSTAQLRRWNHLPKGKALRPKQQIVVFVPAQETNTTATAVAVTRKPTAPAVAAAPRTPSE
MGVKVTKRPVATSESSEPATAAVAEPASAPVAAAAPRTQPPRSARAVAAETTAAEPEAVV
AQAQAHIEAATEYVVRKGDYLNKVARERGLTVTQLMEWNNLQSAAVAPGQKLRLTQPADS
ETTAPVTPAAKAATVAHLPAKATKQRQHLGAAQQRVHIVQPGDTLFNISRRYQGLTVEQL
RKLNNLKSDEVKPGQKLIVAS
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaacgttccgcgcctctgccctgctgttgttggctgctgcctttgctcgcccg
gttgcgggccaaacgcaggtgccacccatagctccgccggaggccggaacggatttcgac
tcgacgcaggtacagctggagctggcgcccgattcgctggtggctgagcctgtgctgagc
cccgaaaagctggcctggatgcaaaccccgcccgccatgcgcgatttggtgggcgaccgg
ctcagctgcatcgactccgacatgccgctggtgttcaacaacgtggtgatgtcgcacgtc
acgttcttcacccagcgcaaccgcacctacatgcagcgggtactggagcgcgagaacctc
tacttcccgcttttcgagaagtacctggccaagtacaacctgccgcaggatttgaagtac
ctggccgtggtggaatcggccctgatcccgacggccaaatcgcgcgtgggcgctactggc
ctgtggcagtttatgggccctaccgccggtgatttgcgcctgcgccgtgacgattgggtt
gacgagcgtatggaccccgaaaaggccaccgaagccgcttgcaaacacctgcgcttcttg
tacggcatgctccacgactgggagttggtactggctgcctataactggggcccgggcaac
gtacagcgcgtaatgcgccgtaccggcaagcgcaattactgggacctgcacccgcacatg
ccgcaggaaacgcgcaactacgtgcctagcttcacggccattttgtacgccatgaagtac
gcgcagcagcacaacctgcacgcccccgacctgcgctaccagtacgcgcagcccatggat
acgctgcaaatcggcggccgtgccttcgatgtagcgcgcctcggccaggccgccggcctc
gactcggtggccctgctgcgcatgaaccctgagctgcgcaaaacctacctgcccgagggc
taccggccctacgccgttaagtttccggcttcggccaggccgttgctgcaacaggtcgac
cgcgccacgctgtttggctactgcctgccgcaggcaaccctgccgcagcccattgcggcc
ttgccacccaggctgcaaggtattgagccattcccctcggcactggctgccaacagcaac
aacgcgccaaagaacaccaagcgcgaagtaggcgcagttgccgaggcgccgcgcacgcgc
cgtaaggtgcacaccgtgcgtaaaggccaaaccctaggtgagctggccgaatggtacggc
gtaagcactgctcaactccggcgttggaaccacctgcccaaaggcaaagccctgcgcccc
aaacagcaaattgtggtgtttgtgcccgcgcaagaaaccaacaccacggccacggcggtg
gccgttacgcgcaagcccaccgcacctgcggttgctgccgcgccccgcacacccagcgaa
atgggcgtgaaagtaaccaagcgcccggtcgccacctcggagtcttccgaacccgctacg
gcggcagtagccgagccggcaagtgcgcccgttgcagcagctgcgcctcgcacgcaaccg
ccccgttcggcgcgtgcagtggcggcagaaactacggccgctgagcccgaggccgtggtt
gcgcaggctcaggctcacattgaagctgccaccgaatacgtggtgcggaaaggcgactac
ctgaacaaggtggcacgcgagcgtggcctaacggtaacgcagctgatggagtggaacaac
ctgcaatcggcagcggtagcgcccggccagaagctgcgcctcacccaacccgccgacagc
gaaaccactgcgcccgtaaccccggccgctaaagcagctacagtagcccacctccctgcc
aaggctacaaagcagcgccagcacctaggggccgcgcagcagcgggtgcacatcgtgcag
cccggcgatacgctgtttaacatctcgcgccgctaccagggccttacggtggagcagctg
cgcaagctcaacaacctcaaatccgacgaggtgaaacccggccaaaagctgattgtggcc
agctag
DBGET
integrated database retrieval system
