Hymenobacter latericus: OIS50_18910
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Entry
OIS50_18910 CDS
T11505
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hyq Hymenobacter latericus
Pathway
hyq03030
DNA replication
hyq03430
Mismatch repair
hyq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OIS50_18910 (dnaE)
03430 Mismatch repair
OIS50_18910 (dnaE)
03440 Homologous recombination
OIS50_18910 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyq03032
]
OIS50_18910 (dnaE)
03400 DNA repair and recombination proteins [BR:
hyq03400
]
OIS50_18910 (dnaE)
Enzymes [BR:
hyq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OIS50_18910 (dnaE)
DNA replication proteins [BR:
hyq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OIS50_18910 (dnaE)
DNA repair and recombination proteins [BR:
hyq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OIS50_18910 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
DUF6282
HHH_3
Motif
Other DBs
NCBI-ProteinID:
UYZ59115
LinkDB
All DBs
Position
1:complement(4256978..4260694)
Genome browser
AA seq
1238 aa
AA seq
DB search
MPTFSHLHCHTQYSLLDGQASISALMKKAQKDGMPAVALTDHGNMFGAFNFVAEANKYNV
KPIVGCEFYLVEDRHKKSFSREKGERDNRFHQLLLAKDQAGYQNLAKLCSMSYIEGVYSK
YPRIDKELLLQYHEGLIATSCCIGAEIPQALLWKSEAEAEQILKWWLDVFGEDYYIEIQR
HGLMNIDNTGKSQEDLNQTLLKWAKKYNVKVICTNDSHYVDQQDFAPHDLLLCVNTGEEY
SIPVGDFQTKYFRLISGEKEVLYDHLDNLRPRAAKDDEVRRQLMRIDEEMQMPKPRSRFG
FPNDQFYFKSQEEMNALFADVPESVDNTNEIVDKITPPKLARDILLPNFPLPAGFANADE
FLRELTYVGAFGPGAGKGIVTMTKPPRYSERTPEIEERLEYELRIIQTMGFAGYFLIVQD
FINKGRDMGVAVGPGRGSAAGSAVAYCVGITNIDPIKYSLLFERFLNPERVSMPDIDIDF
DDVNRQRVIDYVVDKYGKTQVAQIITFGTMAAKSSIKDVARAMELPLPATNELAKMVPEK
PGTTLAGAFAENQELDMIRRDDAPDNLRGQILRLAEKLEGSVRNTGIHAAGVIIAPDDIT
KYIPVSTSKDSDLLVTQFDGKVIESAGMLKMDFLGLKTLTIIVDALTLIKKNHGVDINID
DIPLDDPKTYELYQRGDTIGTFQFESEGMRMYLKDLKPTNIEDLIAMNALYRPGPMQFIP
NFINRKHGREPIEYPHELLEPILNYSQGIMVYQEQIMQTAQILAGYSLGGADLLRRAMGK
KDMKKMAQEREKFCKGALELHGIKEKKANEVFDVMEKFAAYGFNRSHSAAYSVVAYQTGY
LKANYPAEYMAAVLTNNMSDIKKVTFFIEEARRQGVQVLGPDVNESVLKFNVNEKGQIRF
GMAAVKGAGEAAIENIVAEREKKGPYSDIFDFAKRVNLRAVNKKTFESLALAGAFDSFER
YHRRQFVEAPAGDQHLIDKAVRLGQQHQADQDSAQQSLFGGGAFGAVAMPLPKVADMEPW
PATEQLRREKEVVGFYLSGHPLDDFKLEIDSYCTCGLDKIETYKNRDITVAGLISNVMFK
TTKTGQPFVSFNVEDYESSINLALFRDDYTKFSSIINPRNYDKEQIPPMFIRGKYAQRFR
DSDQYEFKIMTMEPLFNVAEKLANGVRVQLDLRTITEPFMDRFMSAVEECAGSKKLEIKF
AEPHEHLTVDTYSRRYRIEPKSFIFRMREMEIDACQLI
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgcccacgttctcgcacctccactgccacacccaatactccctgctcgacggccaagcc
agcatttcggcgctgatgaaaaaggcgcagaaggacggtatgcccgccgtggccctcacc
gaccacggcaacatgtttggggcgttcaactttgtggccgaggccaacaagtacaacgtg
aaacccatcgtgggctgcgagttttacttggtggaggatcggcacaaaaagtctttcagc
cgcgaaaagggcgagcgggacaaccgctttcaccagctgctgctggccaaagaccaggcc
ggctaccagaacctggccaagctttgctccatgagctacatcgagggcgtgtactccaag
tacccgcgcatcgataaggagctgctgctgcagtatcacgagggcctgattgctacctcg
tgctgcatcggggccgaaattccgcaggcgctgctgtggaaatcggaagcagaagcggag
caaatcctgaaatggtggctcgacgtgttcggcgaggactactacatcgagattcagcgc
cacgggctgatgaacatcgataacacgggcaaaagccaggaagacctgaaccaaaccctg
ttgaagtgggccaagaagtacaacgttaaggtcatctgcaccaacgactcgcactacgtc
gatcagcaggactttgccccgcacgatttgctgctgtgcgtgaacaccggcgaggaatac
agcatccccgtgggcgacttccagacgaagtacttccgcctgatttcgggcgagaaggaa
gtgctgtacgaccacctcgacaacctgcgcccgcgcgccgccaaagacgacgaggtgcgc
cggcagctcatgcgcatcgacgaggaaatgcagatgcccaagccccgctcgcgctttggc
ttccccaacgaccagttctacttcaagtcgcaggaagagatgaacgcgcttttcgcagac
gtgccggaaagcgtggacaacacgaacgaaatcgttgataaaatcacgccgcccaagctg
gcgcgcgatatcctgttgcccaacttcccgctgccggctggctttgccaatgccgacgaa
ttcctgcgcgaactgacctacgtgggcgcgttcgggccgggggcgggcaagggcatcgtg
acgatgaccaagccgccgcgctactccgagcgcacgcccgaaatcgaggaacggctggaa
tacgagctgcgcatcatccagacgatgggctttgcgggctacttcctcatcgtgcaggac
ttcatcaacaagggccgcgacatgggcgtggccgtgggcccgggccgtggctcggcggcc
ggctcggcggtggcctactgcgtaggcatcaccaacatcgacccgattaagtactccttg
ctgttcgagcgtttcctgaaccccgagcgcgtgtcgatgcccgatatcgatatcgacttc
gacgacgtgaaccgccagcgcgtgattgactacgtggtagacaagtacggcaaaacgcag
gtggcccagattatcaccttcggtaccatggccgccaagtcgagcatcaaggacgtagcg
cgggccatggagctgcccctgcccgccaccaacgagctggccaagatggtgcccgaaaag
cccggcaccacgctggccggggcttttgccgaaaaccaggagctggacatgatccgccgc
gacgacgcgccggacaacttgcgcggccagattctgcgccttgccgaaaagctcgaaggc
tcggtgcgcaatacgggcatccacgcggccggcgtcatcatcgcccccgacgacatcacg
aagtacattccggtgtcgacctccaaggactcggacctcttggtgacgcagttcgacggc
aaggtgattgagtcggcggggatgctgaagatggacttcctggggctgaagacgctcacg
attatcgtggacgccctcacgctgatcaagaagaaccacggcgtcgacatcaacatcgac
gacattccgctcgacgaccccaagacctacgaactgtaccagcgcggcgacaccatcggc
acgttccagttcgaatcggagggcatgcgcatgtacctcaaggacctcaagcccaccaac
atcgaggacctgattgccatgaacgccctgtaccgccccggcccgatgcagttcattccg
aacttcatcaaccgcaagcacgggcgcgagccgattgagtacccacacgagctgctggag
cccatcctgaactactcccagggcatcatggtgtaccaggagcagatcatgcaaacggcc
cagatcctggccggctactccctaggtggcgccgacctgctgcgccgcgccatgggtaag
aaggacatgaagaagatggcgcaggagcgggagaaattctgcaagggcgctttggagctg
cacggcatcaaggagaagaaagccaacgaggtgttcgacgtgatggagaagtttgcggcc
tacggcttcaaccgctcccactcggccgcctactcggtggtggcttatcagacgggttat
ctgaaggccaactacccggccgaatacatggcggcggtgctgacgaacaacatgtcggac
atcaagaaggtgaccttctttatcgaggaggcgcgccgccagggtgtgcaggtactcggc
cccgacgtgaacgaatcggtgctgaagttcaacgtgaacgagaagggtcagattcgtttc
ggcatggccgccgtgaagggtgccggcgaagccgccatcgagaacattgtggccgaacgc
gaaaagaaaggcccgtactccgacattttcgactttgccaagcgcgtgaacctgcgcgcc
gtgaacaagaaaacgttcgaaagcctggctttggctggagccttcgactcgtttgagcgc
taccaccgccgccagtttgtggaggccccggccggcgaccagcacctcatcgacaaggcg
gtgcgcctaggtcagcagcaccaggccgaccaggactcggcccagcagagcttgtttggg
ggcggcgctttcggggcggtggccatgccgctgcccaaggtggccgacatggagccctgg
cccgctaccgagcagctgcgccgcgaaaaggaagtggtgggcttttacctctcgggccac
ccgctcgacgacttcaagctggaaatagacagctactgcacctgcggcctcgacaagatt
gagacgtacaagaaccgcgacattacggtggcggggctgatttcgaacgtgatgttcaag
acgaccaagacgggccagccgttcgtgtcgttcaacgtggaagactacgaatcgagcatc
aacctggccttgttccgcgacgactacaccaagttttcgagcatcatcaacccacgcaac
tacgacaaggagcagattccgccgatgttcatccggggcaagtacgcccagcggttccgc
gactccgatcagtacgagttcaagatcatgaccatggagccgctgttcaacgtggccgag
aagctggccaacggcgtgcgcgtgcagctcgatctgcgcacgattacggagcccttcatg
gaccgctttatgtcggccgtggaggagtgcgcgggctccaaaaagctcgaaatcaagttt
gccgagccgcacgagcacctcacggtggatacctactcgcgccgctaccgcatcgagccc
aagtcgtttatcttccggatgcgcgaaatggaaattgacgcctgccagctcatctaa
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