Hydrogenophaga sp. RAC07: BSY239_1053
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Entry
BSY239_1053 CDS
T04455
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
hyr
Hydrogenophaga sp. RAC07
Pathway
hyr00541
Biosynthesis of various nucleotide sugars
hyr01100
Metabolic pathways
hyr01250
Biosynthesis of nucleotide sugars
Module
hyr_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
hyr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BSY239_1053 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hyr01005
]
BSY239_1053 (kdsA)
Enzymes [BR:
hyr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
BSY239_1053 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
hyr01005
]
Lipid A
BSY239_1053 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
AOF87157
UniProt:
A0A1B3M231
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Position
complement(1124798..1125655)
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AA seq
285 aa
AA seq
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MKLCGFDIGLNRPFFLIAGPCVIESEQLQMDVAGQLKEITGGLGIPFIFKSSFDKANRSS
GTTYRGPGREKGLEILAKVKRELGVPVLTDVHSEDDIAEAAKVCDVLQTPAFLCRQTDFI
RAVAQSGKPVNIKKGQFLAPHDMKNVIDKARAAAKEAGLNEDNFMACERGASFGYNNLVS
DMRSLAIMRETGAPVVFDATHSVQLPGGQGTSSGGQREMVPVLARAAVAVGVAGLFMETH
PDPAKAMSDGPNAVPLKHMKALLETLLALDAVTKKNGFLEDRFNA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctgcggcttcgacatcggcctgaaccggcccttcttcctgatcgccggcccc
tgcgtgatcgagtccgagcagctgcagatggacgtcgcaggtcagctcaaggaaatcacc
ggcggcctcggtattcccttcatcttcaagagcagcttcgacaaggccaaccgcagcagc
ggcaccacctaccgcggcccgggccgcgagaaaggcctggagattctggccaaggtgaaa
cgtgaactgggtgtgccggtgctcaccgacgtgcacagcgaagacgacatcgctgaagcg
gccaaggtctgcgacgtgctgcagacgcccgccttcctgtgccgccagaccgacttcatc
cgcgccgtggcgcagagcggcaagccggtgaacatcaagaagggccagttcctcgcgccg
cacgacatgaagaacgtgatcgacaaggcacgagccgcagccaaggaagcgggcctgaat
gaagacaacttcatggcctgcgagcgcggcgcgagctttggctacaacaacctcgtgagc
gacatgcgttcgctggccatcatgcgggagaccggcgcccccgtggtgtttgacgccacg
cacagcgtgcagctgcccggcggacaaggcaccagcagcggcggccagcgcgagatggtg
ccagtgctggcgcgcgcggccgtggccgtgggcgtggccggccttttcatggaaacccac
cccgatcccgccaaggccatgagcgacggcccaaacgccgtgccgctcaagcacatgaaa
gcgctgctggaaacactgctggcgctggacgcggtgaccaagaagaacggttttctcgaa
gaccgtttcaacgcctga
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