Hydrogenophaga sp. RAC07: BSY239_1116
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Entry
BSY239_1116 CDS
T04455
Name
(GenBank) bacterial DNA-binding family protein
KO
K05788
integration host factor subunit beta
Organism
hyr
Hydrogenophaga sp. RAC07
Brite
KEGG Orthology (KO) [BR:
hyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyr03032
]
BSY239_1116
03036 Chromosome and associated proteins [BR:
hyr03036
]
BSY239_1116
03400 DNA repair and recombination proteins [BR:
hyr03400
]
BSY239_1116
DNA replication proteins [BR:
hyr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BSY239_1116
Chromosome and associated proteins [BR:
hyr03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BSY239_1116
DNA repair and recombination proteins [BR:
hyr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BSY239_1116
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AOF87523
UniProt:
A0A1B3M348
LinkDB
All DBs
Position
complement(1184996..1185340)
Genome browser
AA seq
114 aa
AA seq
DB search
MPKSKPEHMTRSDLVEALASRFGQLTHRDAEFAVKAILDAMGDALVKGHRIEIRGFGSFS
VNRRSPRVGRNPRSGESVMIPEKRVPHFKPGKALREQVDARTAEILGLEPKKPT
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagtccaaacccgaacacatgacccgcagcgacctcgttgaagcgttggccagc
cgatttggtcagctgacgcaccgcgacgccgagtttgccgtcaaggccatcctcgacgcc
atgggcgacgccttggtcaaaggccaccggatcgagatccgtggttttggcagtttttcg
gtcaatcgccgatcgccacgtgtgggccgcaacccgcgttccggcgagagcgtgatgatt
cccgagaagcgggtgccgcacttcaagccgggcaaagccctgcgcgagcaggtggacgcg
aggacggccgagattctcgggctggaaccgaagaaaccgacgtga
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