Hydrogenophaga sp. RAC07: BSY239_121
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Entry
BSY239_121 CDS
T04455
Name
(GenBank) uracil-DNA glycosylase, 4 family protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hyr
Hydrogenophaga sp. RAC07
Pathway
hyr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSY239_121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyr03400
]
BSY239_121
Enzymes [BR:
hyr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BSY239_121
DNA repair and recombination proteins [BR:
hyr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BSY239_121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AOF87406
UniProt:
A0A1B3M2V6
LinkDB
All DBs
Position
complement(150781..151614)
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AA seq
277 aa
AA seq
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MSAAPDTSFVPELDARQRAMLAEMGVRVWSPKPAPAKAPTPVAQEPEPAVASPAAPAPRP
APVAAPTRTPSPTPPAQHRPVSQVATLDWPALREAVAGCQACGLCQGRTNTVFGVGDEQA
DWMIVGEAPGENEDLQGEPFVGAAGQLLDNMLKAVGRSRSGKGAQGAYIANVLKCRPPAN
RNPQPDEVAQCEPYLARQVALVKPKVIVAMGRFAVQALLKSTEPIGRLRGQVHHYEGVPV
IVSYHPAYLLRTPTDKGKAWADLCLAMATLENTPLRR
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgcgcccgacacttccttcgtgcccgaactggacgcgcgccagcgcgccatg
ctggccgagatgggcgtgcgggtgtggtcgcccaagcccgcgccggccaaggccccgacc
cccgttgcccaggagcccgagcccgcggtggccagccccgcagcaccggcgcccaggccg
gcgcccgtggctgcacccactcggacaccttcccccaccccgcccgcacagcacagaccc
gtcagccaggtcgccacactcgactggcccgccctgcgcgaggccgtggccggctgccag
gcctgcgggctgtgccagggccgcacgaacaccgtgtttggtgtgggcgacgaacaggcc
gactggatgatcgtgggcgaagccccgggcgaaaacgaggacctgcagggcgaacccttt
gtgggtgcggccggccagctgctcgacaacatgctcaaggcggtgggccgcagccgctcc
ggcaagggcgcacaaggcgcctacattgccaacgtgctcaagtgccgcccgcccgccaac
cgcaacccgcagcccgacgaggtggcgcagtgcgagccctacctggcacgccaggtggcg
ctggtcaagccgaaggtgatcgtggccatgggccgctttgcggtgcaggccctgctcaag
agcaccgagcccattggccgcctgcgcggccaggtgcaccactacgaaggcgtgcccgtg
atcgtgagctaccaccccgcctacctgctgcgcacgcccaccgacaagggcaaggcctgg
gccgatctgtgtctcgcgatggcaactctggaaaacacccccctgcgccgctga
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