Hydrogenophaga sp. RAC07: BSY239_1589
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Entry
BSY239_1589 CDS
T04455
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
hyr
Hydrogenophaga sp. RAC07
Pathway
hyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSY239_1589 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hyr03021
]
BSY239_1589 (rho)
03019 Messenger RNA biogenesis [BR:
hyr03019
]
BSY239_1589 (rho)
Transcription machinery [BR:
hyr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BSY239_1589 (rho)
Messenger RNA biogenesis [BR:
hyr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BSY239_1589 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_25
Spore_III_AA
S1CSD-TOTE-2
ATPase_2
ResIII
AAA
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AOF86128
LinkDB
All DBs
Position
complement(1678144..1679406)
Genome browser
AA seq
420 aa
AA seq
DB search
MHLNELKALHVSEVLKQAEALEIENTGRMRKQELMFAIIKKRAKGGELVYADGVLEVLPD
GFGFLRAPDTSYTASTDDIYISPSQIRRFNLHTGDMIEGEVRIPKDGERYFALNKLDKIN
GLPPEDNKHKIMFENLTPLFPKEQMRLERDIKSEENITGRVIDIIAPIGRGQRALIVAPP
KSGKTVMMQHICHAISANHPEVVLMVLLVDERPEEVTEMQRTVRGEVIASTFDEPAARHV
HVAEMVIERAKRLVELGKDVVIMLDSITRLARAYNNVLPSSGKVLTGGVDANALQRPKRF
FGAARKIEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNCEIHLDRRLYEKRVFPSIQL
NRSGTRREELLLQPEILQKTRILRQFMYNMDEIEAMEMVLKSMKSTKNNSEFFDMMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcaacgaactcaaggcactgcacgtgtctgaagtcctcaagcaggctgaagcg
cttgagatcgaaaacaccggccgcatgcgcaagcaggagctgatgttcgccatcatcaaa
aagcgcgccaagggcggcgagctggtgtacgccgacggtgtgctcgaagtgctgcccgac
ggcttcggtttcctgcgtgcacccgataccagttacaccgccagcaccgacgacatctac
atctcgcccagccagatccgccgcttcaacctgcacaccggcgacatgatcgagggcgag
gttcgcattcccaaggacggcgagcgctacttcgcgctcaacaagcttgacaagatcaac
ggcctgcctcccgaggacaacaagcacaagatcatgttcgagaacctgacgccgctgttc
cccaaggaacagatgcgcctggaacgcgacatcaagagcgaagagaacatcacgggccgt
gtcatcgacatcattgcgcccatcggccgtggtcagcgcgcgctgatcgtggcgccgccc
aagagcggcaagacggtcatgatgcagcacatctgccatgccatttccgccaaccacccc
gaggtggtgctcatggtgctgctggtggacgagcgcccggaagaagtgaccgagatgcag
cgcaccgtgcgcggcgaggtcatcgcctccacgttcgacgaacccgcggcgcgccacgtg
cacgtggccgagatggtgatcgagcgcgccaagcgcctggtcgaactcggcaaggacgtg
gtgatcatgctcgactccatcacccgcctggcccgcgcctacaacaacgtgctgccctcc
agcggcaaggtgctcaccggcggtgtggacgccaacgcgctgcagcgccccaagcgcttc
tttggtgcggcccgcaagatcgaggaaggtggctcgctcaccatcatcgccaccgcgctg
gtggacaccggctcgcgcatggacgaggtgatctttgaagagttcaagggcaccggcaac
tgcgagatccacctggaccgccgcctgtacgagaaacgcgtgttcccctcgatccagctc
aaccgcagcggcacccgtcgcgaagagttgttgctgcagcccgagatcctgcaaaagacc
cgaatcctgcgccagttcatgtacaacatggacgaaatcgaggcgatggagatggtgctc
aagagcatgaaatccaccaaaaacaattccgaattcttcgacatgatgcgtcggggcggc
tga
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