Hydrogenophaga sp. RAC07: BSY239_1815
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Entry
BSY239_1815 CDS
T04455
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
hyr
Hydrogenophaga sp. RAC07
Pathway
hyr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BSY239_1815 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyr03400
]
BSY239_1815 (xseA)
Enzymes [BR:
hyr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
BSY239_1815 (xseA)
DNA repair and recombination proteins [BR:
hyr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BSY239_1815 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AOF83879
UniProt:
A0A1B3LSQ5
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All DBs
Position
complement(1923515..1924822)
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AA seq
435 aa
AA seq
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MVDAFSPSQAPAAGRVWAVGPLMRAVADTLAARFNPVAVRGEISGFSRAASGHCYFALKD
ETGQVRCALFRRAAEQLTFNPRDGQLVEARGKLDVYGARGELQLIVESLQPAGQGALFEQ
FLRLKAQLEAEGLFEAARKRPLPAQPRSIGVVTSLGAAALRDVVTALRRRVPHLPVVIYP
ASVQGAQAPSELRAALQSAYSRHAETGESEVLLLVRGGGSLEDLWSFNDPELVRLMARAP
MPVVCGVGHETDFTLADFVADLRAPTPTAAAELCAPAREQRVGELDYLQERLDAGAWSNI
DQRGQRLDRLAQRMGRPSSRLHDSAQQLGRLQHRLQGGWMLTTQQRRNRLAVLQTQLPLA
LRRAMDAQQRRLQRCELSLGLLDPQLVLERGYAFLTDAQGVAVTRAAQAQAGQALTATLA
DGTLDVRVEPDIQRP
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggttgacgcgttttcaccgtcgcaggccccggcggcggggcgtgtgtgggcggttggg
ccgctgatgcgcgccgtggcagacaccctggccgcccggttcaatccggtcgcggtgcgc
ggcgagatttcgggcttttcgcgcgcggccagcggccattgttatttcgcgctgaaggac
gaaacgggtcaggtgcgctgcgcgctgtttcgccgcgcggccgaacagctcaccttcaac
ccgcgcgatggacaactcgtggaagcccgcggcaagctcgacgtgtatggcgcgcgcggc
gagctgcaactcattgtggagtcccttcagccagccgggcagggcgcgctgttcgagcag
ttcttgcgcctcaaggcccaactggaggccgagggcttgttcgaggcagcgcgcaaacgg
cctctgcccgcccagcctcgcagcattggcgtggtcacttcgctgggtgcggcggccttg
cgcgacgtggtcaccgccctgcgccggcgcgtgccgcacctgccggtggtgatctacccc
gcctccgtccagggcgcacaagctccgagcgaactgcgcgccgccctgcagagcgcctac
agccgccacgccgagacgggtgaaagcgaggttctgctgctggtccggggcgggggctcg
ctggaagacttgtggtcgttcaacgatcccgagctggttcgcctgatggcgcgcgcgccc
atgcccgtggtctgcggcgtgggccatgaaaccgacttcaccctggccgacttcgtggcc
gacctgcgggcgcccacgcccaccgccgcggccgagctttgcgctcccgcgcgcgagcag
cgggtgggggagctggattacttgcaggagcggctggatgcgggcgcctggtccaacatc
gaccagcggggccagcgcctcgaccggttggcccagcgcatgggtcgcccctcgtcgcga
ctgcacgacagcgcgcagcaactcgggcgcctgcagcaccgcttgcagggcggctggatg
ttgaccacccagcagcggcgcaaccgattggctgtgttgcagacgcagctgccgctggcc
ttgcgccgcgcaatggacgcgcagcagcggcggctgcaacgctgcgaactgtcactgggg
cttcttgatccccagctggtgctggagcgcggctacgcgtttctcaccgacgcgcaaggg
gtggcggtaacgcgggcagcgcaggcgcaagctggtcaggcgctcaccgccacgctggcc
gacggcaccttggacgttcgcgtggagcccgacattcagagaccctga
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