KEGG   Hydrogenophaga sp. RAC07: BSY239_1920
Entry
BSY239_1920       CDS       T04455                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
hyr  Hydrogenophaga sp. RAC07
Pathway
hyr00010  Glycolysis / Gluconeogenesis
hyr00020  Citrate cycle (TCA cycle)
hyr00260  Glycine, serine and threonine metabolism
hyr00280  Valine, leucine and isoleucine degradation
hyr00310  Lysine degradation
hyr00380  Tryptophan metabolism
hyr00620  Pyruvate metabolism
hyr00630  Glyoxylate and dicarboxylate metabolism
hyr00640  Propanoate metabolism
hyr00670  One carbon pool by folate
hyr00785  Lipoic acid metabolism
hyr01100  Metabolic pathways
hyr01110  Biosynthesis of secondary metabolites
hyr01120  Microbial metabolism in diverse environments
hyr01200  Carbon metabolism
hyr01210  2-Oxocarboxylic acid metabolism
hyr01240  Biosynthesis of cofactors
Module
hyr_M00009  Citrate cycle (TCA cycle, Krebs cycle)
hyr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hyr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
hyr_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:hyr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    BSY239_1920 (lpdA)
   00020 Citrate cycle (TCA cycle)
    BSY239_1920 (lpdA)
   00620 Pyruvate metabolism
    BSY239_1920 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    BSY239_1920 (lpdA)
   00640 Propanoate metabolism
    BSY239_1920 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    BSY239_1920 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    BSY239_1920 (lpdA)
   00310 Lysine degradation
    BSY239_1920 (lpdA)
   00380 Tryptophan metabolism
    BSY239_1920 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    BSY239_1920 (lpdA)
   00670 One carbon pool by folate
    BSY239_1920 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hyr04147]
    BSY239_1920 (lpdA)
Enzymes [BR:hyr01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     BSY239_1920 (lpdA)
Exosome [BR:hyr04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   BSY239_1920 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox HI0933_like FAD_oxidored Pyr_redox_3 FAD_binding_2 AlaDh_PNT_C GIDA NAD_binding_8 Thi4 Amino_oxidase DAO FAD_binding_3 3HCDH_N Lycopene_cycl
Other DBs
NCBI-ProteinID: AOF86314
UniProt: A0A1B3LZN9
LinkDB
Position
complement(2029085..2030512)
AA seq 475 aa
MSQTFDVVVIGGGPGGYIAAIRAAQLGFKVACIDEWKNAAGGPAPGGTCTNVGCIPSKAL
LQSSEHFDHANHHFADHGITATNVKIDIAKMIGRKDTVVKQNNDGILYLFKKNKVTFFHG
RGSFAKAVEAGYEIQVTGAKEELLTARQIIVATGSNARALPGTPFDEEMVLSNDGALRLG
AVPKKMVLIGSGVIGLEMGSVWRRLGSDVTILEGLPTFLGAVDEQIAKEAKKAFDKQGLK
IELGVKVGEIKTSKKGVSVAYTNAKGEAQSLDADKLIVSIGRVPNTIGLNAEAVGLQLDE
RGAIVVDAECRTNLKGVWAVGDVVRGPMLAHKAEEEGVAVAERIAGQHGHVNFNTIPWVI
YTSPEIAWVGETEQQLKARGAAYKAGTFPFLANGRARALGDTTGMVKFLADAVSDEILGV
HIVGPMASELIAEAVVAMEFKASAEDIARICHAHPSLSEATKEAALAVDKRTLNF
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgtcccaaacatttgacgtcgtcgtcatcggcggcggccccggtggctacatcgccgcc
atccgcgcagcccaactcggtttcaaggtcgcctgcatcgacgagtggaaaaacgctgcc
ggaggcccggccccgggcggcacttgcaccaacgttggttgcatcccgtccaaggcgctg
ctgcaatcgtcggaacatttcgaccacgccaaccaccacttcgccgaccacggcatcacc
gccaccaacgtcaagatcgacatcgccaagatgatcggccgcaaagacacggtggtgaag
cagaacaacgacggcatcctgtacctgttcaagaagaacaaggtcaccttcttccatggc
cggggctcgttcgccaaggcggtggaagccggctacgaaatccaggtcacgggtgccaaa
gaggagctgctgaccgcgcgccagatcatcgtggccaccggttccaacgcacgcgccttg
cccggcacgccgttcgacgaagaaatggtgctgtccaacgacggcgcgctgcgcctgggc
gccgtgcccaagaaaatggtgctgatcggctccggcgtgatcggcctggaaatgggctcg
gtctggcgccggctcgggtcggacgtgaccatcttggagggcctgcccacgttcctgggt
gcggtggacgagcagatcgccaaggaagccaagaaggcgttcgacaagcagggcctgaag
atcgaactgggtgtgaaggtcggcgagatcaagacctccaaaaaaggcgtgagcgtggcc
tacaccaacgccaagggcgaagcccagtcgctggacgccgacaagctcatcgtctccatc
ggccgcgtgcccaacaccatcggcctcaacgccgaagcggtgggcctgcagcttgacgag
cgcggcgccatcgtggtcgacgctgaatgccgcaccaacctcaagggtgtgtgggcggtg
ggcgacgtggtgcgcggccccatgctggcgcacaaggcggaagaagagggcgtggcggtg
gccgagcgcatcgccggccagcacggccatgtgaacttcaacaccatcccctgggtgatt
tacaccagccccgagatcgcgtgggtcggcgagaccgagcagcagctcaaggcccgtggc
gccgcgtacaaggccggcaccttcccgttcctggccaacggccgcgcgcgtgcattgggt
gacaccaccggcatggtgaagtttctggccgatgcggtttccgacgagatcctgggcgtg
cacatcgtcggccccatggccagcgagttgatcgccgaggccgtggtggccatggagttc
aaggccagcgccgaagacatcgcgcgcatctgccatgcgcacccctcgctgtcggaggcc
acgaaagaagccgcgctcgcggtggacaagcgcacgctgaacttctga

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