Hydrogenophaga sp. RAC07: BSY239_2100
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Entry
BSY239_2100 CDS
T04455
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
hyr
Hydrogenophaga sp. RAC07
Brite
KEGG Orthology (KO) [BR:
hyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyr03009
]
BSY239_2100 (rumA)
Enzymes [BR:
hyr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BSY239_2100 (rumA)
Ribosome biogenesis [BR:
hyr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BSY239_2100 (rumA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRM5-TYW2_MTfase
Methyltransf_31
TRAM
Methyltransf_25
RrnaAD
Motif
Other DBs
NCBI-ProteinID:
AOF87277
LinkDB
All DBs
Position
complement(2221851..2223332)
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AA seq
493 aa
AA seq
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MTTAATLHVNSLLTTANAAAHDAPESPLPDGWLAVESLDIDAQGIARRPDGKVVFIEGAL
PFEQVSVNVHRKKNNWEAGVVTAVHHESSQRVRPGCPHFGLHAGACGGCKMQHLHESAQV
AVKQRVLEDNLWHLGKVRAEMMLRPIEGPAWGYRYRARLSVRHVHKKGEVLIGFHERKSR
YVADMRVCPVLPPHVSEMLMPLRELIFGMDARETCPQIELACGDSVTAMVLRHLEPLSDD
DISRLRAFAQQHGVQWWLQAKGPDTVKLLDTDGPQLSYALPEFGITMPFKPTDFTQVNPA
INRVLVTRALRLLDAKKDERVIDWFCGLGNFTLPIATTAGEVLGIEGSETLVARSRDNLA
LNQAGRDRPLAPTAFAARNLFEMTPGLLVSDGTAQKWLVDPPREGAFALAKALADLHQNP
AQRGGWTPPQRIVYVSCNPATLARDAGLLVHQAGYRCVAAGVVNMFAHTAHVESMAVFEL
DPTRVPGEDPTPE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccgcagccacccttcacgtaaacagcctcctcaccaccgccaacgccgcggcc
cacgacgcgcccgagagccctctgcccgacggctggctcgcggtggaatccctcgacatc
gatgcccagggcatcgcccgccggcccgatggcaaggtggtcttcattgaaggcgcactg
ccgttcgagcaggtcagcgtcaacgtgcaccgcaagaagaacaactgggaagccggtgtg
gtgacggcggtgcatcacgagtcgtcccaacgggtgcgccccggctgcccgcatttcggc
ctgcacgccggcgcctgtggcggctgcaagatgcagcacctgcacgaatcggcccaggtg
gccgtgaagcagcgggtgctcgaagacaacctctggcacctgggcaaggtgcgcgccgag
atgatgctgcgcccgatcgaagggccggcctggggctaccgctaccgcgcgcgcctgtcg
gtgcgccatgtgcacaaaaaaggcgaggtgctgatcggttttcacgagcgcaagagccgg
tacgtggccgacatgcgggtctgcccggtgctgccgccacacgtcagcgaaatgctcatg
ccgctgcgcgaactcattttcggcatggacgcgcgcgaaacctgcccgcagatcgagctg
gcctgtggcgactcggtgacggccatggtgctgcgccacctggagccgctgagcgacgac
gacatcagccgcctgcgtgcgttcgcgcagcagcacggcgtgcagtggtggttgcaggcc
aaggggccggacacggtcaagctgctcgacaccgatggtccgcagctgtcttacgccttg
cccgagttcggcatcaccatgccgttcaagccaaccgacttcacccaggtcaatcccgcc
atcaaccgggtgctggtcacgcgggccctgcgcctgctggatgcgaagaaggacgagcgc
gtgatcgactggttctgtggcctgggcaacttcaccctgcccattgccaccacggcgggc
gaggtgctgggcattgaaggcagcgagaccctggtggcgcgctcgcgcgacaacctcgcg
ctcaaccaggccggccgcgaccgcccgctggcgcccacggcctttgccgcgcgcaacctg
ttcgagatgacgccgggcctgctggtgtccgacggcacggcgcagaaatggctggtggac
ccaccgcgcgaaggcgcttttgcgctggccaaggccttggcggatctgcaccagaacccg
gcccagcgcggtggctggacgccgccgcagcgcattgtgtatgtgagctgcaatcccgcc
acgctggcgcgcgacgcgggtttgctggtgcaccaggcgggctaccgctgcgtggcggcg
ggcgtggtcaacatgttcgcgcacacggcgcacgtggaaagcatggcggtgttcgaactc
gatcccacccgcgtgccgggcgaggacccgacgccggagtaa
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