Hydrogenophaga sp. RAC07: BSY239_242
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Entry
BSY239_242 CDS
T04455
Name
(GenBank) AMP-binding enzyme family protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hyr
Hydrogenophaga sp. RAC07
Pathway
hyr00061
Fatty acid biosynthesis
hyr00071
Fatty acid degradation
hyr01100
Metabolic pathways
hyr01212
Fatty acid metabolism
hyr02024
Quorum sensing
hyr04146
Peroxisome
Module
hyr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hyr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BSY239_242
00071 Fatty acid degradation
BSY239_242
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BSY239_242
09145 Cellular community - prokaryotes
02024 Quorum sensing
BSY239_242
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hyr01004
]
BSY239_242
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hyr04147
]
BSY239_242
Enzymes [BR:
hyr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BSY239_242
Lipid biosynthesis proteins [BR:
hyr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BSY239_242
Exosome [BR:
hyr04147
]
Exosomal proteins
Exosomal proteins of breast milk
BSY239_242
Exosomal proteins of breast cancer cells
BSY239_242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF2464
Motif
Other DBs
NCBI-ProteinID:
AOF86475
UniProt:
A0A1B3M045
LinkDB
All DBs
Position
complement(270975..272921)
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AA seq
648 aa
AA seq
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MQTTFPQLLLDHAQRRPDAPAMREKEYGIWQTTSWSSMARLVEALACGLHQAGLTRGEHM
VVIGANRPRLYATMLAAQSLGAIPIPLYQDAVGGECVFPINNADVRFCVVEDQEQVDKML
EIREQCPQLSHIYYDDPRGLRNYDQPGLGGVEELIAAGQAHSKAHPQLFREQVAACRPDD
VAAMFFTSGTTGNPKGVVHTHNTLINRADVGARFDKLTPADEVLAYMPPAWIGQNIFSYA
QWLVAGYVVNCPESGATVTIDLKEVGPTYYFAPPRVFEGLLTSVMIRMEDAGAIKRGMFR
YFMDVAQRVGPTRMDGKSIGLVDSIKYQLGDWLVYGPLRNNLGLSRVRVAYTAGEAIGPD
LFSFYRSIGINLKQLYGSTETAVFVCLQPDHEARADTVGVPCEGVEIKLSESGEILVKSP
GLLKGYYKNPTATAEVLTADGWYHTSDAGFIDASGHLKIIDRVKDVGRLMGGVHDGAMFA
PKYVENKLKFFSYIKEAVALGDKRDRVCVMLNIDFEAVGNWAERRNLSYAGYTDLAQKPE
VYELIRDCVEKVNADLSRDELLAGSQISRFLVLHKELDADDGELTRTNKVRRGFISERYA
ALVDALYSGKTEQYIETQVKFEDGRSGSVNATLKLGDAKTFAPVKAAA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgacattcccccagctcttgctggaccacgcccagcgccgccccgacgcgccg
gcgatgcgcgagaaggaatacggcatctggcagaccacgagctggagcagcatggcccgg
ctggtcgaagcgctggcctgcggcctgcaccaggccggcctgacgcgcggtgaacacatg
gtggtgatcggcgccaaccggccccggctctacgccaccatgctggccgcgcagtcgctg
ggggcgatcccgatcccgctctaccaggacgcggtgggcggtgagtgcgtcttcccgatc
aacaacgccgacgtgcgtttctgcgtggtcgaagaccaggagcaggtcgacaagatgctg
gagatccgcgagcagtgcccgcagctctcgcacatctactacgacgacccgcgcggcctg
cgcaactacgaccagcccggcctgggtggtgtggaggaactcatcgccgccggccaggcg
cattccaaggcccatccacagctgttccgcgagcaggtggccgcctgccgccccgatgac
gtggccgcgatgttcttcaccagcggcaccaccggcaaccccaagggcgtcgttcacacc
cacaacaccctgatcaaccgggccgacgtgggagcgcgcttcgacaagctcacccccgcc
gacgaggtgctggcctacatgccgccggcctggatcggccagaacatcttttcttacgcg
caatggctggtggccggctacgtggtgaactgtccggagtccggcgccaccgtgaccatc
gacctgaaggaagtcggccccacctactacttcgcaccaccgcgcgtgttcgaaggcctg
ctcaccagcgtgatgatccgcatggaagacgccggcgccatcaagcgcggcatgttccgt
tacttcatggacgtggcccagcgcgtgggccccacccgcatggacggcaagtccatcggg
ctggtggattccatcaagtaccagctgggcgactggctggtctacggcccgctgcgcaac
aacttggggctgagccgcgtgcgcgtggcctacaccgccggtgaagccatcggacccgac
ctcttcagcttctaccgctccatcggcatcaacctcaagcagctctacggctccaccgaa
accgccgtgttcgtctgcctgcagcccgaccacgaggcgcgggccgacaccgtgggcgtg
ccctgcgagggcgtggagatcaagctcagcgagtcgggcgagatcctggtgaagtcgccc
ggcctcctcaagggctactacaagaacccgaccgccaccgccgaggtgctcacggccgac
ggctggtaccacaccagcgacgccggcttcatcgacgcatccggccacctcaagatcatc
gaccgcgtgaaagatgtgggccgcctcatgggcggtgtgcacgatggcgccatgttcgcg
cccaagtatgtggagaacaagctgaagttcttcagctacatcaaggaagccgtggccctg
ggcgacaagcgcgaccgggtgtgcgtgatgctcaacatcgacttcgaggccgtgggcaac
tgggccgagcggcgcaacctctcgtacgccggctacaccgacctcgcgcaaaaacccgag
gtgtacgaactcatccgcgactgcgtggaaaaggtcaatgccgacctgagccgcgacgag
ctgctcgcgggcagccagatcagccgcttcctggtgctgcacaaggaactggacgccgac
gacggtgagctcacccgcacgaacaaggtgcgccgcggcttcatcagcgagcgctacgcc
gcgctggtggacgccctctacagcggcaagaccgagcagtacatcgaaacccaggtgaag
ttcgaagacgggcgcagcggctcggtcaacgccaccttgaagctgggtgacgccaagacc
tttgccccggtgaaagccgcagcctga
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