Hydrogenophaga sp. RAC07: BSY239_4207
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Entry
BSY239_4207 CDS
T04455
Name
(GenBank) deoxyribodipyrimidine photo-lyase-related family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
hyr
Hydrogenophaga sp. RAC07
Brite
KEGG Orthology (KO) [BR:
hyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyr03400
]
BSY239_4207
Enzymes [BR:
hyr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
BSY239_4207
DNA repair and recombination proteins [BR:
hyr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
BSY239_4207
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AOF87381
UniProt:
A0A1B3M2Q5
LinkDB
All DBs
Position
4448454..4450031
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AA seq
525 aa
AA seq
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MNRPTTLPRPLRRLVLVLGDQLWLDNPALAGFDPAQDAVLMIEAPGEASHVWSHNARIAL
FLSAMRHFQQVLVRKGHPLRYVNLDDAALDQPATASLAARLRHVLTELRPQALWLCEAGE
WRLQQDIEATAAAAGVPMRSFDDTHFFCSRQRFARWTQGRKEWRMEFFYREMRREHGVLM
DGGEPVGGQWNFDADNRKSYPKQGPGLITPPAQFEPDATTREVMALVQTRFADHPGELKS
FAWPVTAEQAREALRHFVDQRLEMFGTYQDAMWTKTPFGWHSLLSVALNLHLIDPREVVA
AAEAAHRDRGLPLASVEGFIRQVLGWREFIRGVYWMDMPGMKTANHYGHTRPLPAWYWNA
QTHMACMKDAVGQTLEHGYAHHIQRLMLTGQFALLAETDPQQVADWYLAVYVDAIEWVEL
PNVAGMALYADGGRFTSKPYVASGQYIDRMSDHCKGCRYQPKLRVGAQACPVTTLYWNFL
DRHETELAASPRTALMVKNLQRMEPAERQAVRDQAVLTLARLGDL
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgaccgacaactttgccgaggcccttgcgccggctggtgctggtgctgggcgac
cagctctggctggacaacccggccctggccggcttcgaccctgcgcaagacgcggtgctc
atgatcgaagcgcccggcgaagccagccacgtgtggagccacaatgcccgcatcgcgttg
ttcctctcggccatgcggcacttccagcaggtgctggtgcgcaagggccacccattgcgc
tacgtgaacctggacgacgccgcactggaccagcccgccaccgcttcgttggccgcgcgg
ctgcgacacgtgttgaccgaactccggccgcaggccttgtggctgtgcgaggcgggcgag
tggcgcttgcagcaggatattgaagccacggcagctgccgccggtgtgcccatgcgcagc
ttcgacgacacccactttttctgcagccgccagcgcttcgcgcgctggacccagggccgc
aaggaatggcgcatggagttcttctaccgcgagatgcgccgcgagcacggcgtgctcatg
gacgggggcgagcccgtgggtgggcaatggaacttcgacgcggacaaccgcaagagctac
cccaaacaaggcccggggctgatcacaccacccgcgcagttcgagcccgacgccaccacg
cgcgaggtgatggcactcgtgcagacgcgcttcgccgaccacccgggtgaactcaagagc
ttcgcctggcccgtcaccgccgagcaagcgcgtgaggcgctgcggcattttgtcgatcag
cgtctggagatgttcggcacctaccaggacgcgatgtggaccaagaccccgttcggctgg
cattctctgctgtcggtggcgctgaatctgcacctgatcgacccgcgcgaggtggtggcc
gcagccgaagccgcgcaccgcgaccggggtctgccgctggccagtgtggaaggcttcatc
cgccaggtgctgggctggcgcgagttcatccgtggtgtgtactggatggacatgcccggc
atgaagaccgccaaccactacggccacacgcgcccgctgccggcctggtactggaacgcg
cagacgcacatggcctgcatgaaggacgctgtgggccagacgctggaacacggttatgcg
caccacatccagcgcctcatgctcaccgggcagttcgcgctgctcgcagaaaccgatccg
cagcaggtggccgactggtacctcgcggtctacgtggacgcgatcgaatgggtcgagctg
cccaacgtggccggcatggcgctctacgccgatggggggcgcttcaccagcaaaccctat
gtggccagcggccagtacatcgaccgcatgagcgaccattgcaagggctgccgctaccag
ccgaagctgcgtgtgggtgctcaggcttgcccggtgaccacgctctactggaactttctg
gaccgccacgagaccgaactcgcagcgagcccccgcaccgcgctgatggtgaagaacctg
cagcgcatggagccagccgaacggcaagccgtgcgggaccaggctgtgttgaccttggcc
cgcctcggcgatttgtaa
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