Hydrogenophaga sp. RAC07: BSY239_4279
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Entry
BSY239_4279 CDS
T04455
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
hyr
Hydrogenophaga sp. RAC07
Pathway
hyr00521
Streptomycin biosynthesis
hyr00523
Polyketide sugar unit biosynthesis
hyr00541
Biosynthesis of various nucleotide sugars
hyr01100
Metabolic pathways
hyr01110
Biosynthesis of secondary metabolites
hyr01250
Biosynthesis of nucleotide sugars
Module
hyr_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
hyr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BSY239_4279 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BSY239_4279 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BSY239_4279 (rfbC)
Enzymes [BR:
hyr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
BSY239_4279 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AOF85869
UniProt:
A0A1B3LYC2
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All DBs
Position
complement(4534459..4535007)
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AA seq
182 aa
AA seq
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MNITPSAIFPDVLIIKPKVFKDDRGFFFETFNQRDFNEATGLNVNFVQDNHSRSFKGVLR
GLHYQAQQPQGKLVRVVSGAVFDVVVDLRKQSPTFGQWEGVELSEENQLLRWIPSGFAHG
FLVQSKSADFLYKSTDFYAQQHERSIRWNDESLAIAWPLNGVSPTLSSKDSAASGFHEVQ
DL
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcacgccttctgccatcttccctgacgtgttgattattaagcccaaggtattc
aaggacgatcgtggcttcttcttcgagaccttcaaccagagggacttcaacgaggctact
ggtctgaacgtgaacttcgtgcaggacaaccacagccgaagtttcaagggtgtgctgcgg
gggctgcactatcaagcgcagcaaccacagggaaagttggttcgggtcgtcagcggcgcg
gtttttgatgtcgtggtggacctgcgaaagcaatcgccaactttcgggcagtgggaaggc
gtcgaactaagtgaggaaaatcagctgcttcgctggattccttcagggttcgctcacggc
ttccttgtgcagagcaagtcggccgattttctatacaaatcgacggacttctatgcgcag
caacacgagcgcagcattcgctggaatgatgagtcgcttgcaatcgcctggccgttgaac
ggcgtatcgccaaccctctcatccaaggattcggcggcgagcgggtttcatgaagtgcaa
gacctttag
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