Hydrogenophaga sp. RAC07: BSY239_4404
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Entry
BSY239_4404 CDS
T04455
Name
(GenBank) RNA polymerase sigma factor, FliA/WhiG family protein
KO
K02405
RNA polymerase sigma factor FliA
Organism
hyr
Hydrogenophaga sp. RAC07
Pathway
hyr02020
Two-component system
hyr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hyr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BSY239_4404
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BSY239_4404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hyr03021
]
BSY239_4404
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hyr02035
]
BSY239_4404
Transcription machinery [BR:
hyr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BSY239_4404
Bacterial motility proteins [BR:
hyr02035
]
Flagellar system
Flagellar assembly proteins
Stator
BSY239_4404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
AOF85701
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Position
4651716..4652429
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AA seq
237 aa
AA seq
DB search
MTSNTAPLSRNEQLKKYSPIVHRAAYHMVSRLPASVEVDDLIQAGMIGLCDAMDRCVPEE
GELEKYAMPRIRGAMIDELRECDWMPRGSRRSRRDIDGAVQRLQQRLLRQLVAQEVASEL
HLDIQAYHALMGKVHLMQLVHMEDIDQLDDEGESVLDGAFGDWHADPLSQIENQRRRKAL
VEAIVGLPQREQYVIVECYVNDRKLREIALDLDVTESRVCQLRSNAITMLRARLQAH
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgaacacagccccgctcagccgcaacgaacagctaaaaaagtacagcccaata
gtgcatcgggcggcgtatcacatggtctcgcgactaccggcctcggtagaggtggacgac
ctgattcaagccggcatgatcggcttgtgtgacgcaatggaccgctgcgtgccggaggag
ggtgaactcgaaaaatacgccatgccccgcatccgcggtgccatgatcgacgagctccgt
gaatgcgactggatgcctcgcggcagccgtcggagccgccgcgacattgatggcgcggtg
caacgcctgcaacaaaggctgctccgccagctggtcgcgcaggaagtggccagcgaattg
cacctggacattcaggcgtatcacgccctgatggggaaggtgcacctcatgcagcttgtg
cacatggaagacatcgaccagctcgacgatgagggcgaatcggtgttggacggtgccttt
ggcgactggcatgccgacccactcagtcagatcgagaaccagcgtcggcgcaaggcgctg
gtggaggctattgttggcctaccccagcgcgaacaatatgtgatcgtcgaatgctatgta
aatgatcgcaagctgcgcgagatagccttggatctggacgtcaccgaatcgcgtgtgtgc
caattgcgcagcaacgccatcacgatgttgcgtgctcgtctgcaagcgcattga
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