KEGG   Hydrogenophaga sp. RAC07: BSY239_609
Entry
BSY239_609        CDS       T04455                                 
Name
(GenBank) DEXH box helicase, DNA ligase-associated
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
hyr  Hydrogenophaga sp. RAC07
Brite
KEGG Orthology (KO) [BR:hyr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hyr03400]
    BSY239_609
Enzymes [BR:hyr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BSY239_609
    5.6.2.6  RNA 3'-5' helicase
     BSY239_609
DNA repair and recombination proteins [BR:hyr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BSY239_609
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: AOF88111
LinkDB
Position
646047..648536
AA seq 829 aa
MPRKQIAIPHPEPSTPPQACAASWMVSRLWTPFEFQREVWSAIGAGRSGLLHATTGSGKT
YAVWLGLIEHLLQTLPAHKPAPLTVLWITPMRALAADSAASLRAPLADLAPGWTLGLRTG
DTPSAERARQDRRWPTVLVTTPESLSLLLARTHAPDELAGVRAVVVDEWHELIGSKRGVQ
VQLALARLRRWQPGLLVWGMSATLGNLDDALRVLCGPDNAQLVRGRVDKALAIDTLIPPE
PGRYSWAGHLGKSMQEPVVKELETASTALVFTNTRSQAEIWYQLLLALRPDWAGQVALHH
GSLDKAVREWVEQGLKSGQLKAVVATSSLDLGVDFLPVERVLQIGSAKGVSRLLQRAGRS
GHAPGRPSRVTLVPTNTLELVEAAAVREAALAGRVESRRSPEQPLDVLVQHLVTVALGGG
FMPDDLFDEVRSAFAYRELSRESFDWVLAFCERGGESLNAYPDYHRIQPDDAGVYRVPDT
PQGRATARRHRLGVGTIVSDAALQVKFMNGGRIGSIEEGFIARLRKGDCFVFAGRLLEFI
RVHEMTAWVKKAEKSKGAVPSWQGSSMPLSSELGDAVLAQMALAAKGRFDSPEMQAARPM
LETQARVSRLPRPGELLLEHMKSREGHHLYLYPFAGRHVHLGLASLLAWRLAREQPNTFS
LSVNDYGLELLSTEPANLTHLLDRSVFSTDDLLAHVMASLNAGELAQRRFREIARIAGLV
FSGYPGAPKSLKQLQASSGLFFEVFRKYDPGNLLLDQAEREVLSQELDIGRLHSSLQGMA
SHSLHCVELTRPSPMSLPLMVERFRERLSTEQLSARLDKLLRELDKANA
NT seq 2490 nt   +upstreamnt  +downstreamnt
atgccgcgcaagcagatcgccattccgcaccccgaaccatccaccccgccgcaggcatgc
gcggcgagctggatggtttcgcgtttgtggacgcccttcgagtttcaacgcgaggtctgg
tctgccatcggcgccggccggagcggcctgttgcacgccaccaccggctcgggcaagacc
tacgcggtctggttgggcctgatcgagcacctgctgcagacgctgcccgcacacaagccc
gcaccgctcacggtactgtggatcacgcccatgcgggcgctggcggccgacagtgcagca
tccctgcgagcaccgctggccgacctggcgcccggctggacgctgggcctgcgcaccggt
gacacgcccagcgcggagcgcgcccggcaagatcggcgctggcccacggtgctggtcacc
acgcccgaatcgctgtcgctcctgctcgcgcgcacccacgcgcccgacgagctggccggt
gtgcgtgcggtggtggtggacgaatggcacgaactcatcggcagcaagcgcggtgtgcag
gtgcagctggcgctggcgcggctgcggcgctggcagcccgggctgctggtgtggggcatg
agcgccaccctgggcaatctggacgacgccctgcgtgtgctctgtggacccgacaacgcc
caactggtgcgcgggcgtgtggacaaggcgctggccatcgacacgctgatcccgcccgag
ccgggtcgttattcgtgggccgggcatctgggcaaaagcatgcaggagccggtggtgaaa
gagctggaaaccgccagcaccgcgctggtgttcaccaacacccgcagccaggccgagatc
tggtaccagttgttgctcgccctgcggcccgactgggccgggcaggtggccctgcaccac
ggcagcctggacaaggcggtgcgcgagtgggtggagcagggactgaaatccggccagttg
aaggcggtggtggccacgtcctcgctcgacctcggcgtcgactttctgccggttgaacgc
gtgctgcagatcggctccgccaagggcgtgtcgcggttgctgcagcgcgccgggcgcagc
ggtcatgcaccgggtcggcccagccgcgtcacgctggtgcccaccaacacgctggagctg
gtggaggccgctgccgtgcgggaagcggcgctggccgggcgcgtggagagccggcgcagc
cccgaacaaccgctggacgtgctggtgcagcacctggtcaccgtggcgctgggtggtgga
ttcatgcccgatgacctgttcgatgaggtgcgcagcgcgttcgcctaccgcgagctttcg
cgcgaatcgttcgactgggtgctggccttttgtgaacgcggcggcgagagcctgaacgcc
taccccgactaccaccgcatccagcccgatgacgccggcgtctaccgcgtgcccgacacg
ccgcagggccgcgccaccgcgcgccgccaccggctgggcgtgggcaccatcgtgagcgac
gcagcgctgcaggtgaagttcatgaacggcgggcgcatcggttccatcgaagaaggcttc
atcgcccgcttgcgcaagggcgactgcttcgtgttcgccgggcgtctgcttgaattcatc
cgcgtgcacgaaatgacggcctgggtgaagaaggccgaaaagtccaagggcgccgtgccc
tcgtggcaaggcagcagcatgcccctgtcgtccgagctgggtgacgccgtgctggcccag
atggcgctggccgcaaagggtcgcttcgactcgcccgaaatgcaggccgcgcgaccgatg
ctggagacccaggcccgcgtgtcgcgcctgccgcggccgggtgagttgctgctcgagcac
atgaagtcccgcgaggggcaccacctgtatctgtacccgttcgccgggcgccatgtgcac
ctggggctggccagcttgctggcctggcggctggcgcgcgagcagcccaacaccttcagc
ctgtcggtcaacgactatggcctcgaactgttgagcaccgagccggccaacctcacgcac
ctgctggaccgttcggtgttcagcaccgacgatctgctggcgcatgtgatggcgtcgctc
aacgcgggtgaactggcccagcggcgttttcgcgagatcgcgcgcatcgccggcctggtg
ttcagcggatacccgggagcgcccaaaagcctcaagcagctgcaggcctccagcggtctg
ttcttcgaggtgtttcgcaagtacgaccccggcaacctgctgctggaccaggcggagcgc
gaggtgctgtcgcaggagctcgacattggccggctgcacagcagcctgcaaggcatggcc
agccacagcctgcactgtgtggagctcacccgccccagccccatgagcctgccgctgatg
gtggagcgctttcgtgagcggctcagcaccgaacaactctccgcgcggctggacaagctg
ctgcgcgaactcgacaaggcgaacgcatga

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