Hydrogenophaga sp. RAC07: BSY239_780
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Entry
BSY239_780 CDS
T04455
Name
(GenBank) DEAD_2 family protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hyr
Hydrogenophaga sp. RAC07
Pathway
hyr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hyr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BSY239_780
09124 Replication and repair
03420 Nucleotide excision repair
BSY239_780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hyr03021
]
BSY239_780
03036 Chromosome and associated proteins [BR:
hyr03036
]
BSY239_780
03400 DNA repair and recombination proteins [BR:
hyr03400
]
BSY239_780
Enzymes [BR:
hyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BSY239_780
Transcription machinery [BR:
hyr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BSY239_780
Chromosome and associated proteins [BR:
hyr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
BSY239_780
DNA repair and recombination proteins [BR:
hyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BSY239_780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
CBP_BcsQ
Motif
Other DBs
NCBI-ProteinID:
AOF84440
UniProt:
A0A1B3LUE0
LinkDB
All DBs
Position
complement(827344..829635)
Genome browser
AA seq
763 aa
AA seq
DB search
MNGTTPPAETLQVAVRVLCAFTAQAGDLDLRFTPSPTAQDGVAGHETVTARRAAPYQREV
PLRARFGDLLVQGRADGFDPDGPRLEEIKTHRGDVALVRENHRALHWAQARVYAWMLCEQ
LGLERIEVALVYFNIDTRNETVLADWHTADELRLHFNGLCSRYLGWARSEQSHRQARDAS
LQTLAFPFDGFRAGQHELAGATWRTHHHGRHLLVQAPTGIGKTMATLFGALKAMPKPGTD
KLLYLTAKTPGRRLALDALARLQPNASTGRLRVLERVAREKACEHPDKACHGDACPLASG
FYDRLPQARIEAAHTAWLDQAGLRSVALKHRVCPYYLGQDMLRWSDVVVGDFNHFFDLSA
HAWALTVGEPWRVGLLVDEAHNLIERARLMYSAELDPLTLAGLRKAPPKGLKASLDRLHR
FWGTLGRGQAAGQVLLNELPEGLVGALQQHAADLSEHLALDTTAPDVRVQAWLFEVLHFV
RVAEVFGDHSLVEINRPEAAARTRAPRPRLAIRNLVPAPHLQPRWQAAHSATLFSATLSP
MEHAIQLLGLPADMARLEVPSPFDPAQLRVRITPHISTRYQDRATSLDALVAVMAEQFHA
QPGNYLAFFSSFDYLQQVLARFAAAHPDIPAWSQSRGMAELERSAFVARFTEASQGIGFA
VLGGAFGEGIDLPGQRLIGAFIATLGLPQVNPLNEQLRARLQLKHGRGYDHAYLFPGLQK
VVQAAGRVIRGPDDRGVVVLMDDRFGHPEVRGLLPPWWRIERS
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgggaccaccccgcccgccgagaccctgcaggtcgccgtgcgtgtgctctgcgcc
ttcaccgcccaggccggtgacctggacctgcgtttcacgccctcgcccaccgcacaggac
ggtgtggccgggcacgagaccgtgaccgcgcgccgggcagcgccctaccaacgcgaagtg
cccctgcgcgcgcgtttcggcgacctgctggtgcagggccgcgccgacggcttcgacccc
gatggcccacggctggaagagatcaagacccaccgcggcgacgtggcgctggtgcgcgag
aaccaccgcgcgctgcactgggcgcaggcgcgcgtgtacgcctggatgctgtgcgagcag
ctcggtctggagcgcatcgaggtggcgctggtgtacttcaacatcgacacacgcaacgag
accgtgctggccgactggcacacggccgacgaactgcggctgcacttcaacgggctgtgt
tcgcgctacctgggctgggcgcgcagcgagcagtcgcaccgccaggcgcgcgatgcctcg
ctgcaaacgctggcctttcccttcgacggttttcgcgcgggacaacacgagctggccggc
gccacctggcgcacccaccaccacggccgacacctgctcgtgcaggcgcccaccggcatc
ggcaagaccatggccacgctgttcggcgcgctcaaggccatgcccaaaccgggcaccgac
aagctgctctacctcaccgccaagacgccgggccgacggctcgcactcgacgcgctggcg
cgcttgcaacccaacgcgtccaccggccgcctgcgggtgctggagcgtgtggcgcgcgag
aaggcctgcgaacaccccgacaaggcctgccacggcgatgcatgccccttggccagcggt
ttctacgaccggctgccgcaggcgcgcattgaggccgcgcacaccgcctggctggaccag
gcggggctgcgcagcgtggcactcaaacacagggtgtgcccctactacctgggccaggac
atgctgcgctggagcgacgtggtggtgggcgacttcaaccatttcttcgacctgagcgcg
cacgcctgggcgctcaccgtgggcgagccctggcgcgtgggcctgctggttgacgaggcg
cacaacctgatcgagcgcgcgcgtctgatgtacagcgccgaactcgacccgctgaccttg
gctgggctgcgcaaagcaccacccaaaggactcaaggcctcgctggatcgcctgcaccgg
ttctggggcaccctgggccgtggccaggcggccgggcaggtgctgctgaacgagctgccc
gagggcctggtgggcgcactgcagcagcacgccgccgacctctcggaacacctggcgctg
gacaccaccgcgcccgacgtgcgggtgcaggcctggctgttcgaggtgctgcacttcgtg
cgcgtggccgaggtgttcggcgaccactcgctggtggagatcaaccgccccgaggccgcc
gcgcgaacccgcgcaccgcgtccccggctggcgatccgcaacctcgtgcccgcgccgcac
ctgcagccgcgctggcaggcagcgcacagcgccaccttgttctcggccacgctcagcccc
atggagcacgccatccagctgctcggtctgcccgccgacatggcgcggctggaggtgccc
tcaccgttcgacccggcgcagctgcgggtgcgcatcacgccgcacatctccacccgctac
caggaccgcgccacatcgctcgacgcgttggtggcggtgatggccgaacagttccacgcc
cagccgggcaactacctcgcgtttttcagcagcttcgactacctgcaacaggtgctggcg
cgttttgccgcagcacacccggacatccccgcttggtcacagtcacgtggcatggcggag
ctggagcgcagtgcgttcgtggcgcgcttcaccgaagccagccagggcatcggttttgcg
gtgctcgggggtgcgtttggtgagggcatcgacctgcccggccagcgcctgatcggcgcc
ttcatcgccacgctgggcctgccccaggtgaacccgctcaacgagcaactgcgcgcacgc
ctgcagttgaaacacggccggggctacgaccatgcctatctgtttcccggtttgcagaag
gtggtgcaggccgccgggcgcgtcatccgcgggcccgacgaccgcggtgtggttgtcttg
atggacgaccgcttcggccaccccgaggtacgtggcctgctcccgccgtggtggcgcatc
gaacgcagctga
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