Hydrogenophaga sp. RAC07: BSY239_885
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Entry
BSY239_885 CDS
T04455
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hyr
Hydrogenophaga sp. RAC07
Pathway
hyr03030
DNA replication
hyr03410
Base excision repair
hyr03420
Nucleotide excision repair
hyr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSY239_885 (polA)
03410 Base excision repair
BSY239_885 (polA)
03420 Nucleotide excision repair
BSY239_885 (polA)
03440 Homologous recombination
BSY239_885 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyr03032
]
BSY239_885 (polA)
03400 DNA repair and recombination proteins [BR:
hyr03400
]
BSY239_885 (polA)
Enzymes [BR:
hyr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSY239_885 (polA)
DNA replication proteins [BR:
hyr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BSY239_885 (polA)
DNA repair and recombination proteins [BR:
hyr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BSY239_885 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BSY239_885 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AOF85043
UniProt:
A0A1B3LW18
LinkDB
All DBs
Position
941864..944731
Genome browser
AA seq
955 aa
AA seq
DB search
MWRDLPDNARMSDASSPTPTLLLVDGSSYLYRAFFAGGEAMSTTLPDGTVLKTGAIRIMI
NMMQKLRKDVRADYAACVFDAKGPTFRDALYPDYKANRSPMPDDLRAQIGPIHEVVRLLG
WKVLDVPGVEADDVIGTLAHVAAQQGVDCIISSGDKDLSQLVNEHITVIDTMNDRRRDIA
GVTAEFGVPPSLMLDYQTLVGDQVDNVPGVPKVGPKTAVKWLQEYGSLEALVARADEIKG
VAGENLRNALGWLPKGRELLTIKTDCDLSEHMEGLPSLEAITIGGQDSDALKVFGEKYGF
KGLVKTLMQLDVPPEQIEEHQAKAQTKGRAGSGSPGLFDEPDLSGSAERTTNLKYDTILT
WAMFDDWLQRVQAADLVALDTETTSLDEMRAEIVGISFSVTPGEAAYIPLRHSGPDAPEQ
LPFDEVLARLKPWLENPKHAKLGQHVKYDRHVFANHGIEVRGYVHDTMLQSYVLEVHKPH
GLASLALRHLGRQGINYEDLCGKGAHQIPFAQVEVAKAAEYSCEDSDQTLDVHQKLWPQL
QADSQPGKGLRFIYELEIASSEALYRIERNGVLIDAPTLARQSHELGSRIHALEQEAYEI
AGQPFNLASPKQLGEIFFDKLGLPVIKKTATGARSTDEEVLEKLAEDYPLPAKILEHRGL
SKLKGTYTDKLAQLAHPATGRVHTHYAQAVAVTGRLSSNDPNLQNIPIRTPEGRRVREAF
VAPAGHVIASADYSQIELRIMAHISGDEALLRAFHEGIDVHRATAAEVFGLEASQVSSEQ
RRYAKVINFGLIYGMSAFGLAKALAIDNTAAKNYITRYFERFAGVKRYMDDTREQAKKLG
HVETVFGRRLVLPDIQNAKGAKLSALERQAVNAPMQGTAADLIKLSMVAVQKALDEQQRA
TKMIMQVHDELVFEVPEAEVDWLKAEIPRLMAGVAELKVPLLAEVGVGPNWDQAH
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgcgatctccccgacaatgcgcgcatgtccgacgcttcatcccccacccccacc
ctcttgctggtcgacggctccagttacctctaccgtgcgttctttgccggcggcgaagcc
atgagcaccacactcccggatggcaccgtgctcaaaacgggcgccatccgcatcatgatc
aacatgatgcagaagctgcgcaaggacgtgcgggccgactacgccgcgtgcgtgttcgac
gccaaggggcccaccttccgcgatgcgctgtacccggactacaaggccaaccgctcaccc
atgcccgacgatctgcgtgcgcagatcggtcccatccacgaggtggtcaggttgctgggc
tggaaggtgctggatgtgcccggtgtggaggccgacgatgtgatcggcacgctggcgcac
gtggcagcgcagcaaggcgtcgactgcatcatctccagcggcgacaaggacctgagccag
ctcgtcaacgagcacatcacggtgatcgacacgatgaacgaccggcggcgcgacatcgcc
ggcgtcacggcggagttcggcgtgccacccagcctcatgctggactaccagaccctggtg
ggtgaccaggtggacaacgtgccgggcgtgcccaaagtgggccccaagacggctgtgaag
tggttgcaggaatacggttcgctggaggcgctggtggcacgcgcggacgagatcaagggc
gtggcgggcgagaacctgcgcaatgcgctcgggtggctgcccaagggccgcgagctgctc
accatcaagaccgattgcgacttgagcgaacacatggaaggcctgccctcgctggaggcc
atcacgatcggcgggcaggattccgacgcactcaaggtgttcggcgaaaagtacgggttc
aaggggctggtgaagaccttgatgcagctcgatgtgccgccggaacagatcgaggagcac
caggccaaggcccaaacgaagggcagggccgggagcggctcaccgggcctcttcgacgaa
cccgacctgagcggcagcgcggagcgcaccaccaacctgaagtacgacaccatcctcacc
tgggccatgttcgacgactggttgcagcgcgtgcaggctgccgacctggtggcactggac
accgaaaccacctcgctcgacgagatgcgtgccgagatcgtgggcatcagcttcagcgtg
acgccgggtgaagcggcctacattccgctgcgccacagcgggcccgacgcgcccgagcaa
ctgccgttcgacgaggtgctcgccagactcaagccctggctggaaaacccgaaacacgcc
aagctcggacaacacgtcaagtacgaccgccatgtgtttgccaaccatggcatcgaggtt
cgggggtatgtgcacgacaccatgctgcagagctacgtgctcgaagtgcacaagccacac
ggcctggccagcctggccttgcgccacctgggccgccagggcatcaactacgaagacctg
tgcggcaagggcgcgcaccagattccgttcgcgcaggtcgaggtggccaaggcggcggag
tattcgtgcgaggacagcgaccagacgctggatgtgcaccagaagctgtggccgcaactg
caggccgacagtcaacctggaaaagggctgcgcttcatctacgaactcgagatcgccagc
agcgaagcgctctaccgcatcgagcgcaacggcgtgctgatcgacgcacccacgctggcc
agacagagccacgagctgggttcacgcatccacgcgctcgaacaggaggcctacgagatc
gctggccagccgttcaacctggccagccccaaacagctgggcgagatcttcttcgacaaa
ctcggcctgccggtgatcaagaagaccgcgaccggcgcgcgcagcaccgacgaagaggtg
ctggaaaagctcgccgaagactatccgctgcccgcgaaaattcttgaacaccggggcctc
tccaaactcaagggcacttacaccgacaagctcgctcaactcgcgcacccggccacgggg
cgcgtgcacacgcactacgcgcaggccgtggccgtgaccgggcgcctgtccagcaacgac
cccaacctgcagaacatccccatccgcacgcccgagggtcggcgcgtgcgcgaggccttc
gtggccccggccggccatgtgattgcgagtgccgactactcgcagatcgagctgcgcatc
atggcccacatcagcggtgacgaagcgctcttgcgcgcgttccacgaaggcatcgacgtg
caccgtgccaccgccgccgaggtgttcggcctggaggcctcgcaggtgagcagcgaacag
cgccgctacgccaaggtgatcaacttcggcctgatctacggcatgagcgcctttggcctg
gccaaggccctggccatcgacaacaccgcggccaagaactacatcacgcgttacttcgaa
cgcttcgccggcgtgaagcggtacatggacgacacgcgcgaacaggcgaagaagcttggc
catgtggaaaccgtgttcggacgccgcctggtcctgcccgacatccagaacgccaaaggt
gccaagctgtcggcgctggagcgccaggctgtgaacgcgcccatgcagggcacggcggcc
gacctcatcaagctcagcatggtggcggtgcagaaggcgctggacgaacagcagcgcgcc
accaagatgatcatgcaggtgcacgacgaactggtgtttgaagtgcccgaggccgaggtg
gactggctcaaggcggagattccgcgcttgatggcaggcgtggccgagctcaaggtgccg
ttgttggcggaggtgggtgtgggacccaactgggatcaggcgcattga
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