Hydrogenophaga sp. RAC07: BSY239_957
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Entry
BSY239_957 CDS
T04455
Name
(GenBank) exonuclease family protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
hyr
Hydrogenophaga sp. RAC07
Pathway
hyr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hyr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BSY239_957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyr03019
]
BSY239_957
03009 Ribosome biogenesis [BR:
hyr03009
]
BSY239_957
Messenger RNA biogenesis [BR:
hyr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BSY239_957
Ribosome biogenesis [BR:
hyr03009
]
Eukaryotic type
Pre-60S particles
RNases
BSY239_957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
AOF84199
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All DBs
Position
1022864..1023469
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AA seq
201 aa
AA seq
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MTSAPTPADTALATAATDTPTLAKSDQNLVWIDCEMSGLDPEKERLLEIAVIITGPNLTP
RIEGPVLVIHQSDAVLGAMDNWNKGTHGKSGLIDKVKASTVTEEQAQAELLAFIGKYVPR
SGSPMCGNTISQDRRFLVKYMPKLEAYFHYRCLDVSTLKELAKRWRPEVYDAFKKHQKHT
ALADVHESIDELEHYRTHFLR
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgacttcagcccccaccccggccgacacggccctggcgaccgccgccaccgacaccccc
accctcgccaaaagcgaccagaacctggtctggatcgactgcgagatgagcggcctggac
cccgagaaggaacgcctgctggagatcgcggtgatcatcaccggtccaaacctcaccccg
cgcattgaaggcccggtgctcgtgattcaccagagcgacgcggtgctgggcgccatggac
aactggaacaagggcacacacggcaaaagcggtctgatcgacaaggtcaaggccagcacg
gtgaccgaagagcaggctcaggccgagttgctggcgttcatcggcaagtacgtgccccgc
agcggctcgcccatgtgcggcaacaccatcagccaggaccgccgcttcctcgtgaagtac
atgcccaagctggaggcctacttccactaccgctgcctggacgtgagcacgctcaaggag
ctggccaaacgctggcggcccgaggtgtacgacgccttcaagaagcaccagaaacacacc
gcgctggccgatgtgcatgagtccatcgacgagctggaacactaccgcacgcacttcctg
cgctga
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