Hydrogenobaculum sp. SN: HydSN_0365
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Entry
HydSN_0365 CDS
T02516
Name
(GenBank) type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hys
Hydrogenobaculum sp. SN
Brite
KEGG Orthology (KO) [BR:
hys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hys03032
]
HydSN_0365
03400 DNA repair and recombination proteins [BR:
hys03400
]
HydSN_0365
Enzymes [BR:
hys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HydSN_0365
DNA replication proteins [BR:
hys03032
]
Prokaryotic type
DNA Topoisomerases
HydSN_0365
DNA repair and recombination proteins [BR:
hys03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HydSN_0365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Phage_pRha
Motif
Other DBs
NCBI-ProteinID:
AGH92989
LinkDB
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Position
302914..305214
Genome browser
AA seq
766 aa
AA seq
DB search
MEILEIPIEEEARQSYLDYAMSVIVGRAIPDVRDGLKPVQRRILYAMYEMDLTPDKPFKK
CARIVGDTMGRYHPHGDQAIYDALVRMAQDFNLRYPLVIGQGNFGSIDGDPPAAMRYTEA
KLSKITLSLLEDIENDTVDFVPNFDESVMEPQVLPAKMPNLLCNGTTGIAVGLATSIPPH
NLKEVCDALVALAQNQDITVEELMQYIKGPDFPTGGIIVGEVSPEVYKTGRGQVTVQAKA
RVEKTSSGREQIIITEIPYMVNKAELIKKIAELARSGKLKEISDLRDESDKEGIRIVIEL
KRDAKGEAVLKKLYKNTSLRKNFPINMVALVGLEPKLLNLKDILLEFFKHRLNVIYRRTE
FFLRKAEERLHIVEGLLICIKDIDKIIETIRASQDTQEAKEKLMNSWSLTEKQAQAILDL
RLQRLTSLETSKLQKEHDELIENIKTYKNILENKQERINIFIKETKELAERFKDPRRTFI
EGMIKEDTYVDVFVTRNGFVKPIELLEEEKSPIVNVASLKFTEGLFIVSNKGRVYWTAGS
EALSGSSIHMKDTDEYVVGAFVREQYNSRLLILTNKGSIKKIPLVEFEYKTQGFQILKLS
EGEEVVYISGSQDESEILILTKKGYINRIQTQDVGATTSSSKAIQCIKLNENDEAISVKA
LDDKVFGLLITEEGYAKKIKLEDIPKKSRTSQGINVLKQKFLNACDLIFYNDDDNFDVLI
STLNGSHIKLDIKSLIQRMKVPAGIGVPEEKVIDLKDDKIYRVVLL
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggaaatattggaaatccctatagaagaagaggcaagacaatcttatcttgattatgcg
atgtctgttatagttggtagggctataccagacgttagagatggtcttaagccggttcaa
agaagaatactgtatgcaatgtatgaaatggacctaaccccagacaaaccctttaaaaaa
tgtgcccgtatcgtaggggatacgatgggaagatatcatccccatggagatcaagctata
tacgatgctcttgtaagaatggctcaggatttcaatcttagatatcctcttgtaatagga
cagggaaattttggttctatagatggagaccctcctgctgcaatgagatatacagaggca
aagctatctaaaataacccttagcttgttggaagatatagaaaacgatactgtagatttt
gtaccaaattttgatgagagtgtcatggaaccccaggttcttccggcaaagatgccaaac
ctcctttgtaatggtactacaggtatagcggtaggtcttgctacttctatcccccctcac
aatctaaaagaagtttgcgatgcgttggtggctttggctcaaaaccaagatataactgta
gaagagcttatgcaatatataaaaggaccagattttcccacaggcggtataatagtgggg
gaagtgtcgccagaggtttacaaaactggaagaggacaggttactgttcaagcaaaggca
agggtagaaaaaacaagctctggaagagaacaaataataataacagaaatcccttacatg
gtcaacaaagcagagcttataaaaaagatagcagaactagcaaggtctggtaagctaaaa
gagatttctgacttaagagacgaatctgacaaagaaggtataagaatagtaatagaacta
aagagagatgccaaaggagaggctgtattgaagaagctttacaaaaacacctcccttaga
aaaaactttcctataaatatggtggctttggtggggcttgagccaaagcttttaaatcta
aaagatattttgctggaatttttcaaacataggctaaatgtgatctatagaaggactgag
tttttcttaagaaaagccgaagaaagacttcatatagtagaaggacttttgatttgtata
aaagatatagacaaaattatagaaaccattagagcttcacaagatacccaagaggccaaa
gaaaaactcatgaatagctggagtctaactgaaaaacaagctcaggcaatacttgattta
agattgcaaagacttacatctttagaaacttctaagcttcaaaaagagcacgatgagctt
atagaaaatatcaaaacttataaaaatatattggaaaacaaacaagaaaggataaacatc
tttataaaagagacaaaagaacttgcagagcgtttcaaagatccaagaagaactttcatt
gaaggtatgataaaagaagatacctatgtggatgtttttgtcacgagaaatggatttgta
aaacctatagagcttttagaagaggaaaaatctcctattgttaatgtggcaagtttgaag
tttacagaaggtcttttcatagtatcaaataaaggaagagtttattggactgctgggtca
gaagctttgtctggaagctccattcatatgaaggataccgacgagtacgttgtaggtgcc
tttgtgagagagcaatacaactcaagacttcttatcttgacaaataaaggctctataaag
aagatacctcttgtggagtttgaatacaaaactcaaggctttcaaatattgaagctctca
gaaggtgaagaggtggtttatataagcggttctcaagatgagagcgaaatacttatttta
accaaaaaaggttatataaatagaattcaaacccaggacgtaggagccaccacatctagc
tcaaaagccattcaatgcataaagcttaatgaaaatgatgaggctatctcggtgaaagct
ttagatgacaaggtttttgggcttttaataacagaagaaggatacgctaaaaagataaag
ctagaggatattccaaaaaaatctaggacatctcaaggtataaacgtactaaagcaaaag
tttttaaacgcttgcgatttgatattttacaacgatgatgataattttgatgtgttgata
tccactttaaacggctctcatataaagcttgatattaaaagcttaatacagcgtatgaaa
gtacctgctggtataggtgtgcctgaggaaaaagtgattgatttgaaagatgacaagatc
tatagggtggtgttgttatga
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