Hydrogenobaculum sp. SN: HydSN_0397
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Entry
HydSN_0397 CDS
T02516
Name
(GenBank) putative tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase with PP-loop ATPase domain protein
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
hys
Hydrogenobaculum sp. SN
Pathway
hys04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
hys00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
HydSN_0397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hys03016
]
HydSN_0397
Enzymes [BR:
hys01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
HydSN_0397
Transfer RNA biogenesis [BR:
hys03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
HydSN_0397
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFACT-R_2
ThiI
tRNA_Me_trans
DUF7411
QueC
DUF561
Motif
Other DBs
NCBI-ProteinID:
AGH93021
LinkDB
All DBs
Position
complement(327203..328240)
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AA seq
345 aa
AA seq
DB search
MSHKPKALVLFSGGLDSQLAAVNISKVQGIEVKLIHFYTGFCITEHKRRLGIPNKDGKIP
QNPALKAAAALELPIEIIDISQEYINVILNPKFGYGKNVNPCLDCRIFMLLKLKEIMEKE
GYDFIVTGEVLGQRPMSQTKDKLFIIEKETGLKGLIVRPLSAKLLPKTIPEEKGLIKREL
MWDISGRSRTKQINLAKTYNIDYEQPSGGCCYLTDEHFAIKFKEELSFKKSLNWDDLSLM
TVGRHLRLPNGTKMIISRNEGETKFLSGFKNRFDWAYVENKAIAILKDLNEEDIDYIARI
MARYCGNKPTYVDISIDKNMIKKIAEPLEDDIINSLKVGAESHVR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgagtcataaaccaaaagcgcttgttctattttctggtgggctggacagccagctcgcc
gcagttaacattagcaaagttcaaggcatagaagtaaagcttattcatttctacactggt
ttttgtataacagagcataaaagaagacttggcattccaaacaaagatggtaaaatacct
caaaatccagctttgaaagctgccgcagctttagaattacctatagaaataatagatata
tctcaagagtatataaatgtaattttaaaccctaaatttggctacggcaagaatgtcaat
ccatgtcttgattgtagaatttttatgcttttaaaattaaaagaaataatggaaaaagaa
ggttatgattttatagtcaccggagaagtactgggacaaagaccaatgtctcaaacaaaa
gataaactttttataatagaaaaagaaacaggccttaaaggcctaatagtaagacctttg
tctgctaagcttttaccaaaaacaataccagaagaaaaaggtctgataaaaagagaatta
atgtgggatatatcaggacgctcaagaacaaagcagataaatttagcaaaaacctacaat
atagattacgaacaaccatctggaggatgctgctatcttaccgatgagcactttgcaata
aagtttaaagaagagttaagctttaaaaaatctctaaattgggacgatctaagtcttatg
acagtaggaaggcacttaaggttaccaaacggcaccaagatgatcatttcaagaaacgaa
ggcgagacaaagtttctaagtggttttaaaaataggtttgactgggcttatgtagaaaat
aaagctattgccatattaaaagatttaaacgaagaagatatagattatatagcaaggata
atggcaagatactgtggcaacaagcctacatatgtagatatatcaatagataaaaatatg
ataaaaaaaattgcagagcctttagaagatgatataattaattcccttaaggtaggagca
gaaagccatgttagatga
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