Hydrogenobaculum sp. SN: HydSN_0627
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Entry
HydSN_0627 CDS
T02516
Name
(GenBank) ribonuclease G and E
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
hys
Hydrogenobaculum sp. SN
Brite
KEGG Orthology (KO) [BR:
hys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hys03019
]
HydSN_0627
03009 Ribosome biogenesis [BR:
hys03009
]
HydSN_0627
Messenger RNA biogenesis [BR:
hys03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HydSN_0627
Ribosome biogenesis [BR:
hys03009
]
Prokaryotic type
rRNA processing factors
HydSN_0627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
HhH-GPD
S1_2
Motif
Other DBs
NCBI-ProteinID:
AGH93240
LinkDB
All DBs
Position
547149..548303
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AA seq
384 aa
AA seq
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MKLVVYKKNDLIFSMLFKSNELLDIKVDNINDPEYSSSIFLGKIKSIANGVEGYFVDIGL
KKDGYLPFKEADKEYKIGDYVVVQVKKEPSKFKGAKLTTKLSFKGKYIIYYEADKSVKTS
HLFDENFKSDYVDKVYRLLREKESVIIRTQAKNVDISKIEQELEFYRKKAKLIRDISHKA
IMQLEPKEPCYISMIKDYVGGIEKIVVSDIEIYNNIVSFILANDLNINVEMIIDKEKLEN
LYEVEKHINRLLSKYVWLESGGFLVIEETEAMTTIDVNSGKNTCDCIESSSYSTNLEAAK
EIPRQIKLRNLGGIIMIDFIFMKDQAHRKEVLDVLKNGFSKDNVQTTVYGYTALGLMEIA
RKKTGRSLFQTIKASKQENIPSAV
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaaattggtagtatataaaaagaatgatttaatattttcaatgctttttaaaagtaac
gaacttttagatattaaagtagacaacataaacgatcctgaatatagctcatctattttt
ttaggtaagataaaatctatcgcaaacggagtagaaggatattttgttgatataggttta
aaaaaagatggatatctgcctttcaaagaagctgataaagaatataaaataggagattat
gttgttgttcaagtaaaaaaagaaccatccaaatttaaaggagctaaattaaccaccaaa
ctctcttttaaaggaaagtacataatatattatgaggctgataaatctgtaaaaacctca
catctttttgatgagaattttaaaagcgattacgttgacaaagtttataggcttttaaga
gaaaaagaatctgtaattattaggactcaagctaaaaatgtagacatatcgaaaatagaa
caagagttggaattttataggaaaaaagcaaagctcataagagacatatctcacaaagct
attatgcaattagaacctaaagagccatgctatatatcaatgataaaagattatgttggt
ggtatagagaaaattgtagtatccgatatagaaatttataacaacatagtgagtttcata
ttggcaaacgatttaaatataaacgtcgaaatgattattgataaagagaagttagaaaac
ttatacgaagtagaaaagcacatcaacaggcttttaagcaagtatgtatggttagaaagc
ggtggttttttagtaatagaagaaacggaggctatgactacaatagatgtaaatagcggt
aaaaatacctgtgattgtatagaatcaagctcttactccacaaacttggaagcagccaaa
gaaataccaagacaaataaagcttagaaatttaggtggtatcataatgatagattttatt
tttatgaaagatcaagcccatagaaaagaggtgcttgatgtattgaaaaatggcttttca
aaagacaacgtccaaaccacagtctatggatatacggctcttgggcttatggagatagca
agaaaaaaaactggaagaagcttgttccaaaccataaaagcatctaaacaagaaaatata
ccaagcgctgtatga
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