Hydrogenobaculum sp. SN: HydSN_0639
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Entry
HydSN_0639 CDS
T02516
Name
(GenBank) Beta-barrel assembly machine subunit BamA
KO
K07277
outer membrane protein insertion porin family
Organism
hys
Hydrogenobaculum sp. SN
Brite
KEGG Orthology (KO) [BR:
hys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
hys03029
]
HydSN_0639
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hys02000
]
HydSN_0639
Mitochondrial biogenesis [BR:
hys03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
HydSN_0639
Transporters [BR:
hys02000
]
Other transporters
Pores ion channels [TC:
1
]
HydSN_0639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
POTRA_2
POTRA_1
DUF4944
DUF5342
Motif
Other DBs
NCBI-ProteinID:
AGH93251
LinkDB
All DBs
Position
558120..560447
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AA seq
775 aa
AA seq
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MKKVFLFILLLVSFGFSQTISKIEVVGNKYIQSGLIKGFMKLHPGMQFSQTMLDEDIKRL
YETGYFKNIAVKEIKKDDHVKLIYIVQDLPIIYRIEFKGNKRLSSKDLARKLGIETEVGK
FGLNQATRGLTPSSSINEKIEIIKQFQLGKVLSEEQIHELINRIKKAYEEAGYSHVGVTY
KIIPVKGASRLVFYIKETKPTYVSDIHFIGNKTFSDGRLLDHMKTQPFSLLAFRWHPPFN
KHILMDDIKRLKKFYENEGFFEVQINKPIIKKHGHWVNITIKINEGPRYKIGKIVFKGNK
MYSEDELLDKIIQHRDSKRYYKKSIIKLIEKRIYDKYGKIGFINEYTSVKKKPDFKNKTV
NLVFHVYEGGPVYAGKIHIRGNYETRDYVIRREMRVQEYDLITRHELSRSKDRIMNLGYY
DNVQIVPVPKPDNFDDIYTKIQERYTGQFSVGLGYNQVTGLAGFASIRKGNFLGTGDIAG
VSLSYGANYQNDSISYTHKWLFNKPIDVTGSLYDTKIYYVDYTVQRVGFDLTFTKEFGEY
WYASLGTSIQKVTYSDISSSAPPVIQSQAGTWQARKLIFSVSHNTTDYYLFPSKGSIQSL
TYTIALPVLGGSEKFQKIVLSNANFIKDHIFYTGTIFSARETVGWAQAYSNSVVPLDDEF
FVGGDYTIRGYSYGYAGPLDSADEPIGATREIVLNFETDYPLYKNIFYVDAFYDTGRGAD
SWSGLKPSNWLGSYGVGIRFITSYAPVRLDLAFKTKPVPGDTAREKISFVLGSFF
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtatttttatttatattgctgttagtatcttttggcttttcccaaactata
tcaaaaatagaagttgttggaaacaaatatatacaatcaggtctcattaaagggtttatg
aagctgcacccaggtatgcaattttctcaaactatgctggatgaggatataaaaaggtta
tatgaaactggatatttcaaaaatatagcagtaaaagaaataaaaaaggacgatcatgta
aaacttatatacattgtacaagatttgccaattatatatcgtatagaatttaaaggcaac
aaaagactgagctctaaagaccttgccagaaaacttggcatagaaacggaggtaggaaaa
tttggattaaatcaagctactagaggtttaacgccatcttccagcataaatgagaagata
gaaattataaaacaattccaattaggaaaagtcttaagcgaagaacaaatccacgagctt
ataaaccgtatcaaaaaagcctatgaagaagctggatactctcatgtgggtgtaacctat
aagataataccagttaaaggggcatcaagactggtgttttatataaaggaaacaaaacct
acctatgtgagtgacattcattttataggtaacaagacttttagcgacggtaggctcttg
gaccatatgaaaacgcaaccctttagtctcttggcttttagatggcacccccctttcaac
aaacatatactcatggatgatataaagagattgaaaaaattttatgaaaatgaaggtttt
tttgaagtccaaataaacaaacccattattaaaaaacatggacactgggtaaatataacc
atcaaaataaacgaagggccaaggtataaaataggtaagatagttttcaaaggaaacaaa
atgtattctgaagatgaacttttagataaaataatacagcacagagatagcaaaaggtat
tataaaaaatctataataaaacttatagaaaaaagaatatatgataaatacggcaagata
ggtttcatcaatgaatacaccagcgtaaaaaagaaaccagattttaaaaataaaactgtg
aatttagtttttcatgtttacgaaggtggtccagtatacgctggtaaaatccatatacga
ggaaattacgaaacaagagactatgttataagaagagaaatgagggtacaagaatacgac
cttattacaagacacgaactaagtagatcaaaggaccgtataatgaacttaggctactac
gacaacgtacaaatagtaccagtgccaaaaccagataactttgatgatatatatacaaaa
atccaagaaagatatacaggtcagttctcagtgggtcttggctacaatcaggtaactggt
cttgctggatttgcatccattaggaaaggtaatttcctaggtaccggtgatatagctggc
gtatctttatcatacggtgctaattatcaaaacgactcaataagctatacacacaaatgg
ttgtttaacaaacctatagatgtaactggatcactatacgatacaaagatctactatgta
gactacactgtgcaaagagttggttttgacttaacctttacgaaagaatttggtgaatat
tggtatgcaagcttaggcacaagcatacaaaaagtaacgtattctgacatatcatcttct
gctccgccggtaatccaatctcaagcgggcacttggcaagcaagaaagttaatattttcg
gtttctcataataccacagattactatttgttcccttcaaagggatctattcaatcttta
acatacacaattgctttaccggtgcttggtggtagtgaaaaattccagaaaattgtgctt
tcaaacgcaaactttataaaagaccatatattctacaccggtacaatattctcagcgaga
gagactgttggttgggctcaagcatattccaattcggttgtacctttggatgatgaattt
ttcgtaggtggtgactatacgataagaggttatagttacggttacgctggtcctcttgac
tcagctgatgaaccaataggtgctacaagggagattgtgttaaactttgaaacggattat
cctctatacaaaaacatcttctacgtagacgccttttacgatactggtagaggtgcggat
tcttggtctggtctaaaaccaagcaattggcttggaagctatggtgtaggtataagattt
ataacctcttatgcaccagtgagacttgaccttgcttttaaaaccaaaccagtaccagga
gataccgcaagagaaaagatatcttttgtacttggatcgtttttctaa
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