Hydrogenobaculum sp. SN: HydSN_0841
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Entry
HydSN_0841 CDS
T02516
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
hys
Hydrogenobaculum sp. SN
Pathway
hys03030
DNA replication
hys03430
Mismatch repair
hys03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HydSN_0841
03430 Mismatch repair
HydSN_0841
03440 Homologous recombination
HydSN_0841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hys03032
]
HydSN_0841
03400 DNA repair and recombination proteins [BR:
hys03400
]
HydSN_0841
Enzymes [BR:
hys01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HydSN_0841
DNA replication proteins [BR:
hys03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HydSN_0841
DNA repair and recombination proteins [BR:
hys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HydSN_0841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
BLOC1S3
DNA_pol3_delt_C
DUF6475
DUF3979
Motif
Other DBs
NCBI-ProteinID:
AGH93441
LinkDB
All DBs
Position
complement(757362..758333)
Genome browser
AA seq
323 aa
AA seq
DB search
MLDVLEYIKKDNNLDNLTHTVVYGKDIYFIQYFEQLIKQKYDTKTYWADELDYENLRNII
TSRNIFNKKIVIIIKNFTELLNKLKKENLDFIKKTQNILIFEEYEDLTEKDIKAVQNILG
DINILTSKQKKPDYLKSLIQKKFKKEGIDLNQDIINELLNIIGTDSLNLKNETDKLLILS
KSMPITKETLSRALVKEPKDEAFSIVDALIKQDVKKALSIFYDSIKLGQHPLVTLGFMQK
QFMNMYLAFKMNVSFDEVCKILNISHPFQKNILSKQLSIVNKDKLFSIVKALQKADMSIK
YYFNDPVEVLEKLIIDIGLMLKS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatgttttggagtatataaaaaaagataacaatctagacaatttaactcatact
gttgtatatggaaaagatatatattttatccaatattttgaacagcttataaaacaaaaa
tacgatacaaaaacatattgggcagacgaacttgattatgaaaatttaagaaatataatc
acttctaggaatatttttaacaaaaaaatagttattataataaaaaattttacggaactc
ttaaacaaattaaaaaaagaaaatttggattttataaaaaaaactcaaaacatacttata
tttgaggagtacgaagatctgacagaaaaagacataaaagctgttcaaaacattcttgga
gatataaatatattaacatcaaagcaaaaaaagcctgattatcttaaaagccttatacag
aaaaaattcaaaaaagaaggcattgacttaaaccaagacataataaacgaattgttaaat
atcataggtacagattctttaaacctaaaaaatgaaacagacaagcttcttatattgtca
aaatctatgcctattactaaggaaacactttcaagagctcttgtaaaagaaccaaaagac
gaagcgttttctatcgtagatgctttaataaagcaagatgtaaagaaagcgctatctatc
ttttacgatagcatcaagttgggtcagcatccgttggtaactcttgggtttatgcaaaaa
caatttatgaacatgtatttggcttttaagatgaacgtaagttttgatgaggtatgtaag
attttaaatataagccatccgtttcagaaaaacatattatcaaaacagttaagtattgtt
aataaggataagctttttagcattgtaaaggctcttcaaaaagccgatatgagtataaaa
tattattttaacgatccagtggaagttttagaaaagcttatcatagatattgggttaatg
ttaaaatcatga
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