Hydrogenobaculum sp. SN: HydSN_0981
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Entry
HydSN_0981 CDS
T02516
Name
(GenBank) DNA replication and repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
hys
Hydrogenobaculum sp. SN
Brite
KEGG Orthology (KO) [BR:
hys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hys03400
]
HydSN_0981
DNA repair and recombination proteins [BR:
hys03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HydSN_0981
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
ChlI
Zn_ribbon_LapB
DnaB_C
AAA_25
Lon_C
AAA_22
AAA
RecA
AAA_16
ABC_tran
GvpD_P-loop
ATP-synt_ab
nSTAND3
NTPase_1
AAA_24
NACHT
MCM
AAA_14
NPHP3_N
AAA_5
AAA_19
PAXNEB
Ploopntkinase3
Rad51
DAP3
CobU
RsgA_GTPase
HVO_2753_ZBP
AAA_30
AAA_29
TsaE
SLFN-g3_helicase
Zeta_toxin
zf-RING_10
Motif
Other DBs
NCBI-ProteinID:
AGH93574
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Position
complement(887576..888916)
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AA seq
446 aa
AA seq
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MAKEKTTYVCQNCGQTYIKWVGRCSACGEWNSVVEEKLTISENIVKSFEKPTKLVDIEKE
QLFRTSTGYKTLDMALGGGIVKGQVILLSGEPGIGKSTLLLKIADFMSREHVVIYASGEE
SSSQISIRASRMDINSSNLYILNSTNIEHIISCAKEYNAKALIIDSIQTMYTNALESSPG
SVAQVRESTFKLVEFCKSSAIPCFIVGHINKEGAIAGPKVLEHIVDTVCQFEGERFNLYR
VLMILKNRYGATGEMAVFKMEDRGLTEVLEPSLFFLSERKENAIGSVIFPHTEGTKPILV
EIQALVLKALYTTPQRKTQGFDVNRLAIILGVLEKEARIFTRDSDVYVNVVSGIEIQEPA
CDLAIAIAIASSKKEKPISKDTAIFGELGLGGEIRAVHHVEARLKELERFGIKKVVLPKS
SIKDLPKTDLELFGVSHIMEAIDIAI
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggaaaaaaccacttacgtatgtcaaaactgcggtcaaacttatataaaatgg
gttggtaggtgtagtgcttgtggtgaatggaattctgttgtagaagaaaagctcaccata
tcagaaaatatagttaaatcttttgaaaagcctacaaaacttgtggatatagaaaaagaa
caactttttaggacttccactggctataaaacccttgatatggctttaggcggtgggatt
gtaaaagggcaggtgatacttttaagcggtgagcctggtattggaaaatctacgctttta
ttaaaaatagcagattttatgtcaagagaacatgttgtgatatacgcttctggggaagag
tcttcctctcaaatatctataagagcgagcagaatggatataaactcatcaaatctatat
atattaaattctacaaatatagagcatataatatcttgtgcaaaagaatacaacgccaaa
gctctcataatagactctatacaaacaatgtataccaacgctttggagtcttcgccggga
tctgtggctcaagtgagggaatctacttttaaacttgtggaattttgtaaaagtagcgct
ataccctgttttatagtggggcatataaataaagaaggtgctatagctggaccaaaggta
ttggagcacatagtggataccgtatgtcaatttgaaggagagcgctttaacctttacaga
gttttaatgattttaaaaaatagatatggagctacaggtgaaatggctgtctttaagatg
gaagatagagggcttacagaagtgttagagccttctttgtttttcttgagtgaaagaaaa
gaaaacgccataggttctgtaatatttccccataccgaaggcacaaagccaatacttgta
gagattcaagctcttgtcctaaaagctctatacaccacccctcagcgtaaaactcaaggt
tttgatgtaaatagacttgccataattcttggtgtgcttgaaaaagaagcgaggattttt
acaagagattcagatgtttatgtaaatgtagttagtggcattgagatacaagaaccagcc
tgtgatttggctatcgctatagctatagcttcttcaaaaaaagaaaaacctatatcaaaa
gatacagctatctttggagaactcggcttaggtggtgagataagagctgtgcatcatgtg
gaagcaagactaaaagagctagagcgctttggtataaaaaaggttgttttgcctaaaagc
tcaataaaagatttacctaagacagatcttgaactttttggtgtaagccatataatggaa
gctattgatatagctatttga
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