Hydrogenobaculum sp. SN: HydSN_1002
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Entry
HydSN_1002 CDS
T02516
Name
(GenBank) RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
hys
Hydrogenobaculum sp. SN
Pathway
hys02020
Two-component system
hys02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hys00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HydSN_1002
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HydSN_1002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hys03021
]
HydSN_1002
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hys02035
]
HydSN_1002
Transcription machinery [BR:
hys03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HydSN_1002
Bacterial motility proteins [BR:
hys02035
]
Flagellar system
Flagellar assembly proteins
Stator
HydSN_1002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
GerE
TerB_C
Sigma70_ECF
Mob_Pre
DUF1492
DUF3853
HTH_17
Rv2175c_wHTH
MenC_N
Motif
Other DBs
NCBI-ProteinID:
AGH93595
LinkDB
All DBs
Position
906666..907403
Genome browser
AA seq
245 aa
AA seq
DB search
MSTSINKDFDIEKKEQREKKILEYIPLVKKICSKMSRNLPPSVDYNDLVSNGIIGLINAI
DHLDESKNPESYIKIRVKGAIYDYLRSLDFGSRNIRDKEHKIKEIIRAFQNEYQRDPTDE
EISSILGESLEEYQNSLYKISFSYLQSLEDMVYKITEENESSYDNFVTSSIETPEEHAVK
SDLAEKLKEAIDKLDEREKLVLQLLFYEELGIKEVADILGISLSRVSQIKSQALEKLRKH
LEETI
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtccacaagcataaacaaagattttgatatagaaaaaaaagaacaacgagaaaagaaa
attttagaatatataccgcttgtaaaaaagatatgcagcaaaatgtcaagaaatttacca
ccaagcgtagattacaacgatttagttagtaacggcataataggacttataaacgctata
gaccatttagatgagtcaaaaaatccagagtcttatataaaaattagagtaaaaggggct
atttatgattaccttagaagtcttgattttggcagtagaaacataagagataaagagcat
aaaataaaagaaattataagagcctttcaaaacgagtatcaacgagatcctactgacgaa
gagataagtagcattttaggtgagagcttagaagagtatcaaaatagcctttataagata
tctttttcctatctacaaagtttagaagacatggtgtataaaataacagaagaaaatgaa
agttcatacgacaactttgtaacatcaagcattgaaaccccagaagaacatgcggtaaaa
tcagatttagcagagaagttaaaagaggctattgataagcttgacgagagagaaaagttg
gttttgcagcttttattttatgaagagcttggtataaaagaagtagcagatatcttagga
atatctttatcaagggtatctcagataaaatctcaagctctagaaaaattaaggaagcat
ttagaggaaactatatga
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