Hydrogenobaculum sp. SN: HydSN_1112
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Entry
HydSN_1112 CDS
T02516
Name
(GenBank) Exodeoxyribonuclease I subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
hys
Hydrogenobaculum sp. SN
Brite
KEGG Orthology (KO) [BR:
hys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hys03400
]
HydSN_1112
DNA repair and recombination proteins [BR:
hys03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HydSN_1112
Archaeal homologous recombinant proteins
HydSN_1112
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AGH93702
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All DBs
Position
1001194..1002336
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AA seq
380 aa
AA seq
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MTKFLHIGDIHAGKTLHNKSRNDDAEYAISQVIDFVKKEPVDFILMAGDIFDQYNPDTEA
TKIIFDFMVRELNDLKIPVVMITGNHDGHSFFEGYKTLAKYANMHLFVKPSPDDFVITIK
DTNIICVPYISPKFIVRLWEDNSSAEYANKVENFINALISKAPRNTFNILLSHMMVKSAK
PTKSEREASIGEYYAINLDNINNLKNLDYVALGHVHRYQKIPTTTDAYYTGSCFQIDFNE
EGQEKYFNFVVLEKHSTNKVEKIKLDTKNQLKTIKVDAKSLNIEDIENVKGYVRVIIDDT
IENTRLLESRLTSEHIASKILEIRRNVFEKPDIQVDINKIRNNLVDFYEEYYKAKYREDL
PEDLKKAFVELQYKVEHIEE
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtttttacacataggcgacatacatgcagggaaaactcttcataacaaatca
agaaacgacgatgcagaatatgccatatctcaagtgatagattttgtaaaaaaagagcct
gtagattttattcttatggcgggggatatttttgatcaatacaacccagatacagaagcc
acaaaaatcatatttgattttatggtaagggagttaaacgatttaaagattccagtggtt
atgatcaccggaaaccacgacgggcatagtttttttgaaggttacaagactcttgccaaa
tacgccaacatgcatttgtttgtaaaaccatctccagacgattttgttatcacaataaaa
gataccaacataatatgtgtgccctacatttctcctaagtttatagttaggctctgggaa
gataactcaagtgcagagtacgctaacaaagtagaaaattttataaatgcgctcatttca
aaagctccaagaaatacctttaatatattgctttctcatatgatggtaaaaagtgcaaaa
ccaacaaaatcagaaagagaagcttccataggggagtattacgcaataaatttagacaac
ataaacaaccttaaaaacttggactacgttgccttagggcatgtgcatagatatcaaaag
atacccaccactacagatgcctattacacaggttcttgttttcaaatagatttcaacgaa
gaaggacaagaaaaatacttcaactttgtggttttagaaaagcattccaccaacaaagta
gaaaagataaaattagacacaaaaaaccagcttaaaactataaaagttgatgctaaaagc
ttaaatatagaagatatagaaaacgtaaaaggatacgtaagagttatcatagacgatacc
atcgaaaacaccaggcttttagaatcaaggctaacatcagaacatatagccagcaaaata
ttagagataagaagaaacgtctttgaaaaaccagatatacaagtagatataaacaaaata
agaaataaccttgtagatttttacgaagaatattacaaggcaaaataccgcgaagatttg
ccagaggatttaaaaaaagcatttgtagaacttcaatacaaagtagagcatatagaagaa
taa
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