Hydrogenobaculum sp. SN: HydSN_1181
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Entry
HydSN_1181 CDS
T02516
Name
(GenBank) transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains
KO
K02584
Nif-specific regulatory protein
Organism
hys
Hydrogenobaculum sp. SN
Pathway
hys02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hys00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HydSN_1181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hys03000
]
HydSN_1181
Transcription factors [BR:
hys03000
]
Prokaryotic type
Helix-turn-helix
Other families
HydSN_1181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF_2
AAA_5
AAA
AAA_2
GAF
AAA_16
Mg_chelatase
AAA_3
AAA_22
TIP49
AAA_19
nSTAND3
MCM
AAA_7
AAA_30
IstB_IS21
HTH_50
ABC_tran
Roc
NACHT
RsgA_GTPase
ATPase
TsaE
Motif
Other DBs
NCBI-ProteinID:
AGH93768
LinkDB
All DBs
Position
complement(1064676..1066184)
Genome browser
AA seq
502 aa
AA seq
DB search
MTNKIKLENIDISLLTSVSKALSQKDFDKALRDILKIFYSFWGVEYSYIAFYDKITKTIK
IREAFGFNQSVKKILFESGKGIVGNIFKNSIPVVIKDPRHDKAFLNKTKILDKIKDETFV
GVPIKSEDETIGVFCLFKNLDRYEELTRVVDIMLIVSAMIGMSYKLFGILQEEKASWEEQ
RQLLAKEFSDTFSIEGFVGKSEAVITLKDTIQKIAMTDSTVLLLGESGVGKTLIAKAIHA
LSDRKDKPFISVNCAAIPETLLEAELFGYEKGAFTGAIHSKKGKFELANGGTIFLDEIGE
LPLQSQSKLLKVIQEKELEKLGAERSIFVNVRVIASTNKDLASMVARGEFREDLYYRLNV
IPIRVPALRERKEDIPLLVKHFLDKFNKHYKKHINIEKEAMEALINYNWPGNIRELENLI
ERLVVINNKDITKEDVLLATKINSNKLQTDIPSIIESTEKEAIKKALEKCSYVKSKAAKM
LGLTLRQLDYRIKKYNIPIERL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgactaataagataaagcttgaaaatatagatatatcgcttttgacctctgtaagtaag
gctctttctcaaaaagattttgataaggctttaagggatattttaaaaatattttactct
ttttggggtgtggaatactcttatatagctttttatgataaaatcacaaaaactataaaa
ataagagaagcttttggttttaatcaaagtgtaaagaagatactgtttgaatctggaaaa
gggatagtaggaaatatatttaaaaacagcatacctgttgtaataaaagacccaagacac
gacaaggcttttttgaacaaaacaaaaatcttagacaaaataaaagatgaaacctttgtg
ggtgtacctataaaatctgaagatgaaaccataggggttttttgtctttttaaaaactta
gatagatacgaagaactcacaagggtagtagatattatgcttatagtaagcgctatgata
ggtatgtcttacaaactttttgggattttacaagaggaaaaagcctcttgggaagaacaa
aggcaacttttggcaaaagagttttcagatacttttagcatagaaggatttgttggaaaa
tcagaagctgtaattacattaaaagatactatccaaaaaatagcgatgacagacagcaca
gtacttttgttaggagaaagtggagtaggtaaaacgcttatagcaaaggcaattcatgct
ttgagtgatagaaaagataaaccttttatatctgtaaactgtgcagcaataccagaaacg
cttcttgaagcggagctgtttggctatgaaaaaggagcttttacaggagctattcattct
aaaaaaggtaaatttgagctagcaaacggaggtacaatatttttagatgagataggtgag
cttcctcttcaatctcaatcaaaactgttaaaggttatacaggaaaaggaattagaaaaa
cttggagctgaaaggagtatatttgtaaatgtgagagtaatagcatccaccaacaaagat
ttagcgtctatggtggcaagaggagagtttagagaggatttgtattacagattaaacgta
atacctataagagtgccggctctaagggagagaaaagaagatataccccttttggtaaaa
catttcttagataaatttaacaagcattacaaaaagcatataaacatagaaaaagaagct
atggaagctcttataaattacaattggccaggcaacataagagagcttgaaaatcttata
gagcgtcttgtggttataaacaataaagacattacaaaagaagacgttttgttggctacc
aagataaattctaataaactacaaactgacataccaagcattatagaatccaccgaaaaa
gaggctatcaaaaaagctttagaaaaatgtagttatgtaaagtcaaaagctgcaaaaatg
cttggacttaccttaagacagttagactacaggattaaaaaatacaacatacctatagaa
aggctttga
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