Hydrogenobaculum sp. SN: HydSN_1211
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Entry
HydSN_1211 CDS
T02516
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hys
Hydrogenobaculum sp. SN
Pathway
hys02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hys00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HydSN_1211
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hys02000
]
HydSN_1211
Transporters [BR:
hys02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HydSN_1211
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AGH93795
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All DBs
Position
1096487..1098232
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AA seq
581 aa
AA seq
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MYFAFKILKNPYINGILFTLICFLPIYFSKSPKVSNIPIKTVDLRKAHISIGKTSNIAYI
VLASDPKTLNPVLAQETSSTDVIAPLFNGLTRIDLKTMSIKPELASSWKILNNGKTYIIY
LRKGLKWSDGKPLTAYDVEFTYNDIYYNPHIPNSIKDTLSVDGKPFKVKALNKYTVEFDL
PHRFAPFLQAISAPILPKHILENAVKQNTFNTFWSVSQKPSLIVGSGPYKLVKYVKGQYV
EYEANPYYYKSSKNLPYIKRIKAFIIQDKNIALMQFLEGDISYVGLSPEDLSYFALNKPK
TPAIVYDLGETPTTTFITFNQNPHADIPKYKLKWFQDRLFRVAISYAIDRKAIASMVYNN
MASPLYGPITPANKPYYKKGLFKRYPFNLSKAKKLLIKAGFYYKKGKLYDKDGHRVEFSL
ITNSDAQDRKYIGAIVKEDLEKIGIKVIFQPIDFNSLVSKLTTPPYQWESVLIGLTGSID
PNDGKNVWYSKGSLHIWYPMEKKPATLWEKELDTLFDEGAKTINQKKRINIYRAAFYLIQ
YYEPMVFIVTPKSLMTSKVYMKNFYPTVWGFYKKDYMYIER
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtattttgcttttaaaatactcaaaaatccctatattaacggcattttatttacactt
atatgttttttgcctatatacttttccaaaagcccaaaagtctccaacatacctataaaa
actgtagacttaagaaaagctcatatatccattggcaagacatctaacatcgcttatatc
gtcttagcttcggatcccaaaaccctaaacccagtactagctcaagagacatcttctaca
gatgtaatcgcccctctttttaacggtcttacaaggattgacttaaaaactatgagcata
aaaccagaacttgcctcttcttggaaaatactaaataacggaaaaacctacataatatat
cttagaaaaggtttaaaatggtccgatggaaaacccctaaccgcttacgatgtagagttt
acctacaacgatatatattataaccctcatattccaaattctataaaagataccttgtca
gtggatggtaaaccttttaaggtaaaagcgttaaacaaatacactgtagagtttgatttg
cctcaccgatttgccccctttttacaagctataagcgctcccatactaccaaagcatatt
ttagaaaacgctgtaaaacaaaatacctttaacacattttggagtgtatctcaaaagcct
tctttaatagtaggctctggcccttataagctcgtcaaatatgtaaaaggccaatatgta
gaatacgaagcaaatccatattattataaaagctcaaaaaacctcccctatataaaacgt
atcaaagcttttattatacaagataaaaatatagccctaatgcaatttttagaaggagat
atatcttacgtcggactatccccagaagatctatcttactttgctttaaacaaaccaaaa
accccggccatagtatatgacttaggggagactccaaccacaacgtttatcacattcaat
caaaatcctcatgcagatataccaaaatataaactaaaatggtttcaagacagacttttt
agagtggctatatcttacgccatagatagaaaagctatagcttctatggtttacaacaac
atggcaagccccctttacggaccaataacccccgccaacaaaccctactataaaaaaggt
ttatttaaacgttatccttttaatctatcaaaagccaaaaaacttcttataaaagctggt
ttttattacaaaaaaggtaagctctacgataaagatggtcatagagtagagtttagcctt
attacaaactcagatgcccaagacagaaaatatataggagccattgtaaaagaagacttg
gaaaaaataggtataaaagtaatatttcaaccaatagacttcaactctttggtatctaaa
cttacaacacctccttatcaatgggaaagcgttttgataggtctaactggttccattgac
ccaaacgatggtaaaaacgtttggtattcaaagggttctttacatatatggtatcctatg
gagaaaaaaccagccacactttgggaaaaagagctcgatacgttgtttgacgaaggagca
aaaaccataaaccaaaaaaagcgtataaatatatatagggctgctttttatttgattcag
tattacgagcctatggttttcatagtcacgcctaaaagcctaatgacctcaaaagtctat
atgaaaaatttttatcctacagtctggggcttttataaaaaagattatatgtatattgaa
aggtga
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