Hydrogenobaculum sp. SN: HydSN_1261
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Entry
HydSN_1261 CDS
T02516
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
hys
Hydrogenobaculum sp. SN
Pathway
hys00900
Terpenoid backbone biosynthesis
hys01100
Metabolic pathways
hys01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hys00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
HydSN_1261
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hys01006
]
HydSN_1261
Enzymes [BR:
hys01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
HydSN_1261
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
HydSN_1261
2.5.1.29 geranylgeranyl diphosphate synthase
HydSN_1261
Prenyltransferases [BR:
hys01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
HydSN_1261
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AGH93845
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All DBs
Position
complement(1149070..1149846)
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AA seq
258 aa
AA seq
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MIFDDLRPKIEKRLRELLTPFEPKVLYDAMAYYVFQEGKRIRPVLCVIGGYACDLDEEDA
ITLGCAIEFIHNYSLIHDDMPELDNDDERRGKPTCHKIFGQDIALLAGDGLLSLAFDILS
NESLYKNPKNLAKVVNYVSKNAGIEGMVAGQVYDIKGEKDFLKVASLKTAALIKTSLVIP
SILKGVDFSLYEKLGHNIGVLFQLTDDYYDKDGAYVVLGEKPLLKLIQDYKNTIFTLINQ
TNVSSYLKEYVDFISFGI
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgatttttgatgatttaagaccaaagatagaaaaaagactaagagagcttttaacgcct
tttgagccaaaggttttatatgatgcaatggcttattatgtatttcaagagggtaaacgc
ataagacccgtcttgtgtgtaatagggggttatgcttgtgatttagatgaagaagatgct
ataacccttgggtgcgctatagagtttatccacaactactcccttattcacgatgatatg
ccagagcttgacaacgacgatgaaagaagaggaaaacccacatgtcataagatatttggt
caagatatcgcccttttggcaggagatggtcttcttagcttagcttttgatatattatca
aacgaaagcttatataaaaatcccaaaaacctcgctaaagtggtaaattacgtttctaaa
aacgcaggtatagaaggcatggtagcaggtcaagtgtacgatataaaaggtgaaaaagat
tttcttaaagtggcctctttaaaaaccgccgctcttataaaaacctctttggttatacca
tcgatattaaaaggtgtagatttttctttatacgaaaagcttggacacaatataggcgta
ttatttcaactaaccgatgattattacgataaagacggggcatacgttgttttaggtgaa
aaacctcttttaaaacttatacaagattataaaaataccattttcactctcataaaccaa
acaaacgtatcttcttatcttaaagagtatgtagattttataagctttggtatatag
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